Homer de novo Motif Results (outpt/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 472
Total background sequences = 43063
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T G A C T G A A G C T C T A G A C G T T C A G C G T A C T A G C T A G A G C T A G T C G A T C 1e-807-1.860e+0366.10%0.10%47.0bp (74.9bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.609)
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motif file (matrix)
2 A C G T A G T C A G T C C T G A G A T C T C G A C T G A C T A G A C G T A C G T C T G A G A T C 1e-768-1.769e+0355.08%0.03%22.2bp (61.7bp)ZNF354C/MA0130.1/Jaspar(0.621)
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motif file (matrix)
3 G A T C A C G T A G C T G C T A A G C T C T G A A G T C A C G T C T A G T C A G A G C T A G T C 1e-745-1.718e+0347.67%0.01%35.7bp (28.5bp)PB0079.1_Sry_1/Jaspar(0.557)
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motif file (matrix)
4 T C A G G A T C C T G A C G A T A C G T C T G A C T A G T A C G A G C T A G T C C T G A G A C T 1e-708-1.633e+0353.18%0.04%32.1bp (87.1bp)FOSL1::JUND(var.2)/MA1143.1/Jaspar(0.720)
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motif file (matrix)
5 A C G T A G T C A G T C A C G T A C G T A G C T A C T G A C G T A C G T A G T C A C T G A T C G 1e-703-1.620e+0358.26%0.09%29.4bp (94.0bp)PB0061.1_Sox11_1/Jaspar(0.810)
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motif file (matrix)
6 A G T C A G T C A C G T C A T G A C G T A C T G A G T C A G T C A C G T A G T C A C G T A C G T 1e-700-1.612e+0358.26%0.09%44.3bp (105.3bp)SPI1/MA0080.5/Jaspar(0.646)
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motif file (matrix)
7 A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C 1e-684-1.575e+0344.28%0.01%24.1bp (58.3bp)PRDM1/MA0508.3/Jaspar(0.728)
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motif file (matrix)
8 A G T C A G C T A G C T C G A T A G T C G A C T A G T C C G T A C T A G A G T C C G T A A C G T 1e-671-1.547e+0355.08%0.08%30.2bp (85.7bp)PRDM1/MA0508.3/Jaspar(0.672)
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motif file (matrix)
9 G A T C C T A G C G T A C A G T A G C T C A T G T C A G G T A C G C A T C G T A A C T G A G T C 1e-587-1.352e+0351.48%0.10%25.9bp (68.2bp)POL004.1_CCAAT-box/Jaspar(0.644)
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motif file (matrix)
10 C T A G A T C G C G T A A G T C C G T A G C T A C T G A A G C T C G T A A G T C T C G A C T A G 1e-578-1.331e+0347.46%0.06%31.1bp (69.0bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.587)
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motif file (matrix)
11 C G T A A G C T A C G T A G C T C T A G C T G A C G T A C T A G A C T G A G C T A C T G A C G T 1e-576-1.327e+0344.49%0.04%30.3bp (65.7bp)TBX5/MA0807.1/Jaspar(0.656)
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motif file (matrix)
12 C T A G A G T C A G T C C G T A C T G A A G C T G A T C C T A G C A T G A C T G 1e-536-1.235e+0356.78%0.30%45.5bp (71.5bp)NFY(CCAAT)/Promoter/Homer(0.840)
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motif file (matrix)
13 C G T A C G T A C G T A C G T A C G T A A C T G A C G T A C G T A G T C A C G T C G T A C G T A 1e-500-1.153e+0336.44%0.02%26.7bp (33.9bp)PB0194.1_Zbtb12_2/Jaspar(0.753)
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motif file (matrix)
14 G T A C A G T C C T A G A G C T A G C T G A T C A G T C G C T A C T A G G A T C 1e-490-1.131e+0353.81%0.33%38.3bp (74.6bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.757)
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motif file (matrix)
15 A G T C A C G T A G T C A C G T A C G T A G T C A G T C A C G T A C G T C G T A 1e-482-1.110e+0350.64%0.25%28.1bp (75.8bp)ETV4/MA0764.2/Jaspar(0.711)
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motif file (matrix)
16 C T A G A C T G A C G T G T A C A G T C C G T A C G T A C T A G A G T C C G T A 1e-463-1.067e+0335.81%0.03%33.6bp (17.3bp)Dux/MA0611.1/Jaspar(0.598)
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motif file (matrix)
17 A C G T C G T A A C T G A G T C A G T C A G C T A C T G A C G T A C G T A G T C 1e-452-1.041e+0336.65%0.04%32.2bp (62.2bp)GRHL2/MA1105.2/Jaspar(0.726)
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motif file (matrix)
18 C G T A A G T C A C G T A C G T A G T C A T G C A C G T A G T C A G T C A C G T 1e-348-8.018e+0240.47%0.29%21.0bp (91.3bp)ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer(0.873)
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motif file (matrix)
19 A C G T A G T C A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A 1e-311-7.179e+0243.01%0.61%22.0bp (76.2bp)HOXC13/MA0907.1/Jaspar(0.675)
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motif file (matrix)
20 A C G T A G T C A C G T A G T C A G T C A C G T A G T C A C G T 1e-231-5.342e+0247.25%2.19%21.7bp (82.5bp)ZNF317/MA1593.1/Jaspar(0.629)
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motif file (matrix)
21 A C G T C T A G A G T C C T A G A C T G C G T A C G T A C G A T 1e-193-4.448e+0251.48%4.42%46.6bp (74.1bp)CEBPG/MA0838.1/Jaspar(0.758)
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motif file (matrix)
22 A G T C A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C G T C G T A 1e-169-3.913e+0215.04%0.03%50.6bp (36.7bp)SIX1/MA1118.1/Jaspar(0.673)
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motif file (matrix)
23 A G T C C G T A A T C G A G C T C T G A T A C G A C T G C A T G G C A T C T G A C T A G G T C A 1e-157-3.620e+0216.10%0.06%45.0bp (77.5bp)ZKSCAN1/MA1585.1/Jaspar(0.648)
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motif file (matrix)
24 C G T A C G T A G T A C A G T C C T A G A C T G C G T A A G T C C G T A A T G C 1e-145-3.341e+0218.43%0.17%49.5bp (79.1bp)Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer(0.711)
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motif file (matrix)
25 A G C T A C T G A G T C A G T C G T C A A C G T A C T G A C T G G T A C C G T A C G A T T C A G 1e-107-2.474e+029.53%0.02%49.9bp (45.6bp)p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer(0.832)
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motif file (matrix)
26 C G T A A C G T A C G T A C G T C G T A A C T G A T C G A G T C A C G T C G T A C G T A C G T A 1e-59-1.371e+025.30%0.01%40.7bp (0.2bp)POU3F3/MA0788.1/Jaspar(0.568)
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motif file (matrix)
27 A G T C A C G T A C G T A G C T A G T C A C G T A C T G A G T C C G T A A C T G C T G A C G T A 1e-57-1.335e+026.57%0.04%35.9bp (78.6bp)ETV4/MA0764.2/Jaspar(0.711)
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motif file (matrix)
28 A C T G A C G T A C T G A G C T C T G A A G T C A G C T A G T C 1e-50-1.160e+0212.50%0.76%44.2bp (72.7bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.680)
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motif file (matrix)
29 A C G T C G T A C G T A A C G T A C G T C G T A C T A G C T A G 1e-47-1.099e+0215.89%1.67%38.0bp (75.7bp)VSX2/MA0726.1/Jaspar(0.912)
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motif file (matrix)