Homer de novo Motif Results (Jurkat_CD3_vs_Input_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 463
Total background sequences = 49175
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G A T C G C G T A C T A G A C T G C T G A G T C A T G C A C G T A A C T G C G T A A C T G 1e-14-3.372e+012.81%0.10%48.1bp (46.6bp)NFATC2/MA0152.1/Jaspar(0.605)
More Information | Similar Motifs Found		motif file (matrix)
2 * A T C G G A T C A G T C C G T A T C G A G T A C A G T C A T G C A C G T A G T C A C G T C T A G 1e-11-2.659e+013.46%0.31%55.6bp (69.3bp)PB0180.1_Sp4_2/Jaspar(0.631)
More Information | Similar Motifs Found		motif file (matrix)
3 * C G A T A C G T T C A G A C G T A C G T C G T A A C G T A G T C A C G T A C G T C G T A A G T C 1e-10-2.468e+011.08%0.00%48.0bp (52.0bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.719)
More Information | Similar Motifs Found		motif file (matrix)
4 * C T A G A C T G A C T G A C T G C G T A A C G T A C T G A T G C A C T G A T C G A G T C A G T C 1e-10-2.390e+011.30%0.01%54.5bp (51.2bp)MZF1/MA0056.1/Jaspar(0.652)
More Information | Similar Motifs Found		motif file (matrix)
5 * C G T A G C T A C G T A A G C T G T A C C T G A G T C A A C G T T A C G T G A C C G T A A C T G 1e-10-2.311e+014.97%0.90%55.0bp (60.9bp)Gfi1b/MA0483.1/Jaspar(0.708)
More Information | Similar Motifs Found		motif file (matrix)
6 * A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T 1e-9-2.287e+011.51%0.03%53.8bp (56.5bp)INSM1/MA0155.1/Jaspar(0.738)
More Information | Similar Motifs Found		motif file (matrix)
7 * A C G T A G T C A C G T G T A C A G T C A G C T A G T C G T C A A G T C G T C A A G C T A C T G 1e-9-2.250e+012.38%0.15%54.5bp (58.2bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.626)
More Information | Similar Motifs Found		motif file (matrix)
8 * G C T A G A C T T G A C G C T A T G C A C G A T C T A G C T A G A T C G T G C A 1e-9-2.235e+0111.88%4.59%55.4bp (63.9bp)SOX9/MA0077.1/Jaspar(0.724)
More Information | Similar Motifs Found		motif file (matrix)
9 * T A C G C G A T G C A T C A T G C A G T A T C G C G A T G A T C G T A C G A T C 1e-9-2.222e+019.29%3.07%56.6bp (64.8bp)PB0208.1_Zscan4_2/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
10 * A T C G A G T C C G T A A G T C C G T A A G T C A G T C G T A C A C T G C G T A A C T G A C T G 1e-9-2.186e+010.86%0.00%34.5bp (0.0bp)KLF4/MA0039.3/Jaspar(0.676)
More Information | Similar Motifs Found		motif file (matrix)
11 * C T A G A G T C C G T A A C T G T A G C C T G A C T G A A T C G T G C A G T C A 1e-9-2.137e+0125.27%14.38%54.9bp (64.7bp)PB0207.1_Zic3_2/Jaspar(0.662)
More Information | Similar Motifs Found		motif file (matrix)
12 * A G T C A C G T C G A T A C T G C T A G C A T G A T C G T G A C A G T C G T A C 1e-9-2.119e+014.75%0.91%46.7bp (64.5bp)ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer(0.744)
More Information | Similar Motifs Found		motif file (matrix)
13 * T C G A A G T C A G T C A C G T A C T G T C A G A T G C G T C A A C G T A G C T 1e-8-2.071e+015.18%1.11%61.0bp (63.6bp)Hand1::Tcf3/MA0092.1/Jaspar(0.735)
More Information | Similar Motifs Found		motif file (matrix)
14 * G A C T A G C T C G T A A G C T C T G A T A C G T A G C C A G T C T A G T C G A 1e-8-2.065e+0110.15%3.74%49.4bp (66.0bp)Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer(0.670)
More Information | Similar Motifs Found		motif file (matrix)
15 * A C T G C T A G A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G C G T A 1e-8-2.030e+011.30%0.02%36.7bp (58.0bp)Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer(0.674)
More Information | Similar Motifs Found		motif file (matrix)
16 * T C A G G T A C A C G T T C A G A T G C C G T A A C T G A G T C G A C T C T G A 1e-8-2.026e+015.62%1.33%46.6bp (64.5bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.724)
More Information | Similar Motifs Found		motif file (matrix)
17 * G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A 1e-8-2.010e+017.99%2.55%55.2bp (60.9bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.696)
More Information | Similar Motifs Found		motif file (matrix)
18 * A G C T A C T G A T C G C G T A C T A G C G T A A C T G A C T G A G T C A C T G 1e-8-2.007e+011.94%0.10%46.1bp (46.5bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.674)
More Information | Similar Motifs Found		motif file (matrix)
19 * C T A G C T G A T G C A C A G T A T C G G T A C G C T A C A G T A C T G G A T C 1e-8-1.951e+0119.22%10.14%53.4bp (68.9bp)PB0028.1_Hbp1_1/Jaspar(0.683)
More Information | Similar Motifs Found		motif file (matrix)
20 * C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T 1e-8-1.890e+011.51%0.05%43.7bp (60.6bp)PB0128.1_Gcm1_2/Jaspar(0.655)
More Information | Similar Motifs Found		motif file (matrix)
21 * G T C A A C G T C T G A A G T C A G T C A C G T A G T C A C G T A C T G A G T C A G T C C G T A 1e-8-1.846e+011.08%0.02%43.0bp (45.5bp)SPIB/MA0081.1/Jaspar(0.563)
More Information | Similar Motifs Found		motif file (matrix)
22 * C G T A A G T C A G T C G C T A G T C A G T A C A G T C C G A T G T A C A G T C 1e-7-1.726e+013.24%0.52%59.1bp (63.0bp)PB0150.1_Mybl1_2/Jaspar(0.640)
More Information | Similar Motifs Found		motif file (matrix)
23 * A G T C A G T C A G T C C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T G T C A 1e-7-1.634e+010.86%0.01%44.4bp (55.8bp)MYCN/MA0104.4/Jaspar(0.803)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C G T C G A T C G T A C G A T C T G A A G T C C T G A A G T C 1e-6-1.598e+0119.22%10.95%54.8bp (63.8bp)PH0148.1_Pou3f3/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
25 * G T A C G T C A G A T C G T C A A G T C G T C A C T A G A C T G G A T C C G A T A G C T C T G A 1e-6-1.557e+013.46%0.67%54.8bp (62.3bp)RHOXF1/MA0719.1/Jaspar(0.605)
More Information | Similar Motifs Found		motif file (matrix)
26 * A C T G A G T C A G T C G T C A A C T G A G T C A G C T A C T G A C T G A G T C A C G T C G T A 1e-6-1.545e+010.86%0.01%30.7bp (43.4bp)Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer(0.739)
More Information | Similar Motifs Found		motif file (matrix)
27 * C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A 1e-6-1.443e+0131.32%21.48%55.2bp (65.2bp)Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer(0.693)
More Information | Similar Motifs Found		motif file (matrix)
28 * A G T C A G T C G C A T A G T C A G T C G C T A A G T C G A C T C G T A A G T C A G T C G T C A 1e-6-1.421e+014.10%1.04%52.0bp (65.1bp)ZNF354C/MA0130.1/Jaspar(0.626)
More Information | Similar Motifs Found		motif file (matrix)
29 * C T A G A T G C T A C G A G T C C A T G A T G C T A C G A G T C G C T A A T G C 1e-5-1.363e+015.40%1.76%51.3bp (58.6bp)PB0095.1_Zfp161_1/Jaspar(0.802)
More Information | Similar Motifs Found		motif file (matrix)
30 * T C A G C T G A T A C G A G C T T C G A C G A T A T C G G A C T 1e-5-1.324e+0113.61%7.32%56.2bp (73.0bp)SD0001.1_at_AC_acceptor/Jaspar(0.668)
More Information | Similar Motifs Found		motif file (matrix)
31 * A C G T C G T A A C G T A G C T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A G T C 1e-5-1.252e+010.65%0.01%51.4bp (36.2bp)NFIL3/MA0025.1/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
32 * A G T C A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A T G C A C G T A G T C 1e-5-1.252e+010.65%0.01%57.2bp (27.9bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.762)
More Information | Similar Motifs Found		motif file (matrix)
33 * A G C T C T G A C T A G C G A T C T G A C T A G A C G T G T C A A C T G A C G T G T C A T A C G 1e-5-1.161e+011.51%0.15%55.4bp (62.0bp)MEF2B/MA0660.1/Jaspar(0.540)
More Information | Similar Motifs Found		motif file (matrix)
34 * A C G T C G T A A C T G A G T C A C T G C G T A C G T A A G T C 1e-4-1.037e+011.08%0.08%60.0bp (58.3bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.603)
More Information | Similar Motifs Found		motif file (matrix)
35 * A G T C A T C G A C G T A G T C A T G C A C G T C G T A A C G T A C T G A G C T A G T C C T A G 1e-4-1.003e+010.43%0.00%48.1bp (0.0bp)Sox2/MA0143.3/Jaspar(0.654)
More Information | Similar Motifs Found		motif file (matrix)
36 * C T A G C G T A C T G A A C T G C G T A A C T G C T G A A C T G G T C A A G C T C G T A A C G T 1e-4-1.003e+010.43%0.00%45.8bp (40.2bp)PB0126.1_Gata5_2/Jaspar(0.701)
More Information | Similar Motifs Found		motif file (matrix)
37 * A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G 1e-4-1.003e+010.43%0.00%49.8bp (0.0bp)PH0117.1_Nkx3-1/Jaspar(0.684)
More Information | Similar Motifs Found		motif file (matrix)
38 * T C G A A C G T A C G T A T G C A G T C G T C A A C G T A C G T A T G C A G T C C T G A A G C T 1e-3-6.946e+000.65%0.04%45.8bp (59.5bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.725)
More Information | Similar Motifs Found		motif file (matrix)