Homer de novo Motif Results (eb5_vs_input_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2071
Total background sequences = 47691
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * T G A C A T G C A C T G A T G C A C G T A C T G A G T C A C G T A T C G A C T G 1e-11-2.672e+012.80%0.97%56.8bp (56.8bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.700)
More Information | Similar Motifs Found
motif file (matrix)
2 * A G C T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C T G A A G T C A C T G A C T G 1e-11-2.547e+010.29%0.00%43.2bp (2.8bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.745)
More Information | Similar Motifs Found
motif file (matrix)
3 * A G T C A G C T T C G A C G A T T C G A T G A C T C G A A T C G T C G A G A C T 1e-9-2.243e+011.88%0.56%55.8bp (58.1bp)CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer(0.636)
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motif file (matrix)
4 * C T G A G T A C C T A G A C T G A G C T A C T G T C G A G T C A C T A G A C T G 1e-9-2.154e+011.40%0.34%60.5bp (53.9bp)RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer(0.640)
More Information | Similar Motifs Found
motif file (matrix)
5 * A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A 1e-9-2.136e+015.26%2.78%57.3bp (57.6bp)NEUROD1/MA1109.1/Jaspar(0.707)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C T G A C T G A G T C A C T G A C T G C G T A A C G T A T C G C G T A A G T C C G T A A G C T 1e-9-2.097e+010.34%0.01%42.4bp (54.7bp)Atf3/MA0605.1/Jaspar(0.710)
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motif file (matrix)
7 * T G A C C T A G A C T G A T G C G T A C A C T G A T G C T A C G G A C T A T G C T G C A A G C T 1e-8-2.054e+010.24%0.00%27.1bp (0.0bp)CREB3/MA0638.1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
8 * C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T 1e-8-2.045e+010.39%0.02%55.3bp (74.4bp)PH0147.1_Pou3f2/Jaspar(0.711)
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motif file (matrix)
9 * T A G C C T G A C G T A C T G A G C T A T G C A A C G T C T G A A C T G A G C T 1e-8-2.009e+017.58%4.61%56.9bp (55.5bp)MEF2C/MA0497.1/Jaspar(0.795)
More Information | Similar Motifs Found
motif file (matrix)
10 * A T C G A C G T A C T G A G T C A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C 1e-8-1.942e+010.53%0.04%54.2bp (59.3bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.735)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A T A C G T A G C C G T A T A C G T G C A C G A T G A T C T C G A A T C G 1e-8-1.866e+019.13%5.95%52.4bp (56.8bp)Gata4/MA0482.1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
12 * T C A G G C T A C T A G T A C G A C T G A G C T C A T G T A G C C G A T G T A C 1e-7-1.773e+011.74%0.59%50.2bp (58.0bp)PB0196.1_Zbtb7b_2/Jaspar(0.712)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C C G A T A G C T G T A C A C G T C G T A A C T G C T A G C A G T C G T A A C G T C G T A 1e-7-1.730e+010.43%0.03%55.1bp (55.3bp)PB0198.1_Zfp128_2/Jaspar(0.620)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T C G T A G A C T C G T A G T C A A C T G A C G T T A G C A C G T C T G A 1e-7-1.712e+012.99%1.39%53.6bp (54.6bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.694)
More Information | Similar Motifs Found
motif file (matrix)
15 * T G A C A T C G A C T G T G C A G C T A G T C A T A G C T G A C G C A T C G T A 1e-7-1.667e+012.22%0.90%55.6bp (53.5bp)KLF5/MA0599.1/Jaspar(0.599)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T G T A C C G T A A C T G A C G T A C T G C G T A A C T G A C G T A T C G C T A G C G T A 1e-6-1.596e+010.29%0.01%42.6bp (59.3bp)ZSCAN4/MA1155.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
17 * G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A 1e-6-1.546e+011.30%0.40%60.7bp (55.5bp)PH0044.1_Homez/Jaspar(0.709)
More Information | Similar Motifs Found
motif file (matrix)
18 * G T A C C A G T A G T C T C A G A T G C C T A G G A T C A T C G A T G C A C T G 1e-6-1.506e+010.72%0.14%53.4bp (50.6bp)PB0095.1_Zfp161_1/Jaspar(0.754)
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motif file (matrix)
19 * T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A 1e-5-1.380e+010.72%0.15%45.2bp (47.5bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.594)
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motif file (matrix)
20 * A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G C T A C T G C G T A 1e-5-1.356e+010.53%0.08%58.5bp (60.8bp)E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.751)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A A C G T A C T G A C T G A C T G A G T C A C T G A G T C C G T A A T C G 1e-5-1.325e+010.29%0.02%55.0bp (52.2bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G A C G T A G T C A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A G T C 1e-5-1.304e+010.19%0.01%64.8bp (71.1bp)Klf12/MA0742.1/Jaspar(0.589)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G C T A C G T A G C T A C G T A G C T A C G T A C G T A C G T A C G T A C T G A G C T A C G T 1e-5-1.245e+0110.19%7.46%66.4bp (62.6bp)ZNF384/MA1125.1/Jaspar(0.816)
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motif file (matrix)
24 * C T G A C T G A C A G T T A C G T A C G G T A C C T G A G A C T A T G C A C T G 1e-5-1.164e+010.43%0.06%52.8bp (59.6bp)Klf12/MA0742.1/Jaspar(0.548)
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motif file (matrix)
25 * A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G 1e-4-1.146e+010.19%0.01%47.5bp (34.5bp)MEIS3/MA0775.1/Jaspar(0.627)
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motif file (matrix)
26 * C T A G C T A G C T G A C T G A C T A G C T G A C T A G C T G A C T A G G T C A C T G A T C G A 1e-4-1.043e+019.71%7.29%58.1bp (55.0bp)E2F6/MA0471.1/Jaspar(0.640)
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motif file (matrix)
27 * C G T A A C G T A G T C A G T C A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C G T 1e-4-1.034e+010.19%0.01%54.4bp (47.7bp)PB0098.1_Zfp410_1/Jaspar(0.783)
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motif file (matrix)
28 * T A C G G A T C T C A G T A C G G A C T T C A G C A T G G A T C C A T G T C A G G A T C T A C G 1e-4-9.309e+005.46%3.77%58.0bp (55.1bp)PB0010.1_Egr1_1/Jaspar(0.727)
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motif file (matrix)
29 * C G A T A C T G A G C T A C G T A G T C G A C T A T G C G T C A A T G C G A T C C A T G G A T C 1e-3-9.203e+000.14%0.01%40.2bp (63.7bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.674)
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motif file (matrix)
30 * C G T A A C T G A G T C A C G T A T G C A C G T A C T G C G T A A C T G A C T G A G T C A G T C 1e-3-9.203e+000.14%0.00%53.4bp (11.7bp)Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer(0.642)
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motif file (matrix)
31 * A C G T A C T G A G T C A G T C A C G T A T G C G T A C A G T C A C G T A G T C A C G T A G T C 1e-3-8.505e+000.24%0.03%52.2bp (59.4bp)WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer(0.671)
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motif file (matrix)
32 * A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G 1e-2-5.648e+000.10%0.01%61.4bp (29.5bp)SD0002.1_at_AC_acceptor/Jaspar(0.639)
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motif file (matrix)
33 * A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G 1e-2-5.434e+000.34%0.10%56.9bp (52.4bp)Ahr::Arnt/MA0006.1/Jaspar(0.718)
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motif file (matrix)
34 * A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A 1e-2-4.644e+0029.21%26.89%57.9bp (54.8bp)PB0179.1_Sp100_2/Jaspar(0.727)
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motif file (matrix)
35 * A G T C A G T C C T A G C G T A G T C A C T A G A G T C A G T C A C T G C G T A 1e-1-3.284e+000.10%0.02%45.0bp (50.6bp)IRF5/MA1420.1/Jaspar(0.782)
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motif file (matrix)
36 * C T A G C T A G C T A G C T A G C T A G A C T G A C T G A C T G C T A G C T A G C T A G A C T G 1e0-7.898e-010.05%0.03%53.0bp (52.4bp)PB0097.1_Zfp281_1/Jaspar(0.915)
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motif file (matrix)