Homer de novo Motif Results (MF_con_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2522
Total background sequences = 46666
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G G T A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C G A T A C T G C A T G 1e-93-2.148e+025.71%0.54%39.9bp (60.7bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.924)
More Information | Similar Motifs Found
motif file (matrix)
2 C G A T T C G A T C G A T A G C T G C A A C T G G T A C A C G T T A C G A C G T 1e-75-1.731e+0222.24%9.77%52.9bp (67.7bp)Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer(0.989)
More Information | Similar Motifs Found
motif file (matrix)
3 A T G C A G T C C G A T A C T G A T G C A G T C C G T A C T G A T C A G C T G A 1e-45-1.047e+0235.35%22.83%52.8bp (63.2bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.955)
More Information | Similar Motifs Found
motif file (matrix)
4 C A T G T A C G G T A C G C A T A C T G A T G C G T A C G C T A A C T G G T A C G T A C G C T A 1e-21-5.027e+018.48%4.11%54.1bp (65.4bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.891)
More Information | Similar Motifs Found
motif file (matrix)
5 T C A G T C A G C G T A G C T A C G A T C A G T A G C T C A G T 1e-20-4.695e+0121.17%14.25%57.4bp (62.7bp)TEAD4/MA0809.1/Jaspar(0.864)
More Information | Similar Motifs Found
motif file (matrix)
6 T A G C C G A T T G C A G C A T C G A T G C A T C G A T C G A T C T G A C A T G 1e-17-3.941e+014.95%2.09%53.3bp (59.0bp)MEF2A/MA0052.3/Jaspar(0.932)
More Information | Similar Motifs Found
motif file (matrix)
7 G A C T C A T G C G T A T A C G G C A T G T A C T C G A T A G C C G T A A T G C 1e-16-3.724e+012.06%0.50%55.1bp (59.9bp)Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer(0.806)
More Information | Similar Motifs Found
motif file (matrix)
8 G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A 1e-15-3.638e+0122.67%16.37%56.0bp (61.6bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.754)
More Information | Similar Motifs Found
motif file (matrix)
9 T C A G G A C T T G A C T G C A G A C T G A C T G C A T C T A G 1e-14-3.447e+0123.07%16.88%56.4bp (62.0bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.785)
More Information | Similar Motifs Found
motif file (matrix)
10 A C T G C T G A C G A T A T C G T G C A A C G T A C G T C G A T C T G A A C G T 1e-14-3.400e+011.78%0.42%55.8bp (56.9bp)PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer(0.806)
More Information | Similar Motifs Found
motif file (matrix)
11 C G A T A G C T G C A T C G A T T C A G C A T G A G T C G A C T T G A C G C A T 1e-14-3.355e+013.09%1.10%55.9bp (61.5bp)PB0016.1_Foxj1_1/Jaspar(0.609)
More Information | Similar Motifs Found
motif file (matrix)
12 G C A T A T C G C G A T A T C G A C T G G A C T G C A T G C A T 1e-13-3.126e+0110.98%6.87%56.3bp (61.3bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.953)
More Information | Similar Motifs Found
motif file (matrix)
13 C G T A C G T A T G A C A G T C A G T C A C G T C G T A C G T A G T A C A G T C A G T C A C G T 1e-12-2.933e+010.36%0.01%48.4bp (28.7bp)ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer(0.610)
More Information | Similar Motifs Found
motif file (matrix)
14 C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C 1e-12-2.879e+014.95%2.43%53.4bp (63.8bp)NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer(0.754)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C 1e-10-2.344e+0126.00%20.66%55.3bp (67.0bp)POL010.1_DCE_S_III/Jaspar(0.624)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T C A C T A G C T A G A C T G A C T G C T A G T C G A A C G T A C G T C G T A 1e-9-2.281e+011.15%0.27%56.5bp (55.9bp)PH0122.1_Obox2/Jaspar(0.844)
More Information | Similar Motifs Found
motif file (matrix)
17 * C A T G A C T G C G T A C G T A C G T A G T C A T G C A C G A T 1e-9-2.168e+0111.93%8.33%57.6bp (61.8bp)NFATC2/MA0152.1/Jaspar(0.865)
More Information | Similar Motifs Found
motif file (matrix)
18 * C A G T A C T G A T C G A C G T G T C A G T C A C G T A A G T C C G T A A C T G G A T C A C T G 1e-8-1.992e+010.91%0.19%51.8bp (60.1bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.768)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G C G T A A G T C C G T A A C T G A T C G C T G A A T G C G T C A A C T G G T C A A G T C 1e-7-1.765e+010.44%0.04%52.9bp (56.6bp)MEIS2/MA0774.1/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
20 * T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T 1e-7-1.626e+010.44%0.05%48.6bp (53.1bp)PB0122.1_Foxk1_2/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A A C T G A G T C C G T A A G T C A C G T A C T G A G C T C A T G C G T A A G T C C G T A 1e-6-1.601e+010.32%0.02%56.0bp (41.6bp)PB0099.1_Zfp691_1/Jaspar(0.719)
More Information | Similar Motifs Found
motif file (matrix)
22 * T G A C C G T A A G C T A C T G A T C G A C T G C G T A A C T G A C T G C G T A A C G T A C T G 1e-6-1.530e+010.32%0.02%42.8bp (48.8bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.696)
More Information | Similar Motifs Found
motif file (matrix)
23 * C G T A A T G C C G T A G T A C C G A T G T A C C G T A A C T G A C G T T A C G 1e-6-1.503e+012.14%0.99%51.6bp (62.6bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.665)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C T G C G T A A C G T A C G T A C G T A C G T G T A C A G C T A T C G C G T A A C T G C T A G 1e-5-1.212e+010.28%0.03%53.6bp (48.1bp)PH0068.1_Hoxc13/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
25 * C T G A A C T G A C G T T C A G G T A C A C G T A G T C G T A C C T G A A G T C 1e-4-9.926e+000.55%0.15%46.4bp (54.6bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.761)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A 1e-4-9.554e+000.40%0.08%52.3bp (54.0bp)PH0162.1_Six2/Jaspar(0.714)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C 1e-3-8.627e+000.16%0.01%55.5bp (30.7bp)GCM2/MA0767.1/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T 1e-3-8.546e+000.12%0.01%54.1bp (36.0bp)Ddit3::Cebpa/MA0019.1/Jaspar(0.644)
More Information | Similar Motifs Found
motif file (matrix)
29 * G T C A A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C T G A C G T A C T G A G C T 1e-2-6.564e+000.08%0.00%57.2bp (12.7bp)KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer(0.742)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A A C G T C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G 1e-1-4.438e+000.08%0.01%55.4bp (56.0bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.612)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A C T G A G T C C G T A A C T G 1e-1-3.898e+000.08%0.01%39.8bp (37.0bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.600)
More Information | Similar Motifs Found
motif file (matrix)
32 * C G T A A C G T A G T C A C G T A G T C A C G T A G T C A G T C C G T A A C T G C G T A A C T G 1e0-2.278e+000.04%0.01%56.4bp (57.1bp)GFX(?)/Promoter/Homer(0.643)
More Information | Similar Motifs Found
motif file (matrix)