Homer de novo Motif Results (N1_hfd_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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Total target sequences = 625
Total background sequences = 48573
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C 1e-27-6.329e+015.92%0.47%50.2bp (56.7bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.894)
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motif file (matrix)
2 G T C A C T G A G T C A T C G A A G T C C T G A A C G T G T A C G A C T A C T G 1e-25-5.838e+0122.08%8.32%50.8bp (62.4bp)ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer(0.885)
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motif file (matrix)
3 G C A T A G C T G A C T A C G T A T C G A C T G G T C A G A C T 1e-21-4.948e+0163.04%43.80%53.2bp (61.7bp)NFIX/MA0671.1/Jaspar(0.838)
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motif file (matrix)
4 A C G T A G C T A G T C C G T A A C T G A G T C C G T A A G T C A G T C A C T G A G T C A C T G 1e-13-3.121e+011.28%0.01%42.6bp (57.2bp)REST/MA0138.2/Jaspar(0.698)
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motif file (matrix)
5 A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A 1e-12-2.987e+012.40%0.15%51.4bp (61.0bp)PB0056.1_Rfxdc2_1/Jaspar(0.616)
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motif file (matrix)
6 A C G T G A T C A G T C G A T C T A G C T G A C C G T A C T A G C T A G T C A G 1e-12-2.963e+0117.76%8.49%52.9bp (60.3bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.770)
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motif file (matrix)
7 A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T 1e-12-2.859e+010.96%0.01%21.2bp (24.5bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.659)
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motif file (matrix)
8 A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C 1e-12-2.840e+012.24%0.14%44.3bp (56.9bp)SIX2/MA1119.1/Jaspar(0.655)
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motif file (matrix)
9 A G C T A C G T A C G T G T C A A G T C C G T A A C G T A C T G G T A C A C G T A C T G A C T G 1e-12-2.782e+011.12%0.01%29.6bp (70.4bp)PB0206.1_Zic2_2/Jaspar(0.655)
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motif file (matrix)
10 A C T G A G T C C T G A A C T G C G T A C G T A C G T A A C G T G T C A A G T C A C G T A C T G 1e-12-2.782e+011.12%0.01%57.6bp (61.9bp)PB0145.1_Mafb_2/Jaspar(0.611)
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motif file (matrix)
11 * G A C T A G C T A T G C A C T G T A C G C G A T A G C T G C A T G A T C G T C A 1e-11-2.640e+017.84%2.47%52.8bp (60.4bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.808)
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motif file (matrix)
12 * C G T A A T C G G A C T T C A G A G C T C A G T A G C T G T C A 1e-11-2.610e+0114.56%6.71%56.9bp (61.2bp)FOXL1/MA0033.2/Jaspar(0.873)
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motif file (matrix)
13 * C G A T A C T G T C G A C T G A A C T G C T A G A T C G G T C A G A T C A C G T C G A T A G C T 1e-10-2.529e+013.52%0.54%53.8bp (57.0bp)NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer(0.601)
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motif file (matrix)
14 * G A T C C G T A C T A G T C A G G T A C A C G T A G C T A G C T C A G T A T C G 1e-10-2.461e+015.92%1.59%60.0bp (64.5bp)PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer(0.693)
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motif file (matrix)
15 * G A C T C T G A A C T G A G T C G T A C C G T A A C T G A T G C C T G A A T C G 1e-10-2.442e+016.40%1.84%63.2bp (67.2bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.698)
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motif file (matrix)
16 * C A T G G C T A A G C T C A T G G A C T C G T A C G T A C G A T 1e-10-2.324e+0125.60%15.59%55.1bp (61.2bp)Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer(0.742)
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motif file (matrix)
17 * G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C 1e-10-2.311e+012.24%0.20%59.1bp (51.4bp)Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer(0.740)
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motif file (matrix)
18 * G T A C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C T G 1e-9-2.122e+011.12%0.03%55.2bp (61.2bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.634)
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motif file (matrix)
19 * A G T C A G T C A C G T A G T C G T A C A C G T A T G C C G T A A C G T A C G T A C T G C T G A 1e-9-2.122e+011.12%0.03%68.5bp (56.5bp)SPIC/MA0687.1/Jaspar(0.635)
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motif file (matrix)
20 * A G T C A C G T A C T G A C T G G T A C C G T A A T C G G T C A G A T C C T A G C T A G T G A C 1e-8-2.043e+012.56%0.35%37.0bp (67.5bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.756)
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motif file (matrix)
21 * A G T C A C G T A G T C A T C G A C T G A C G T A C G T A C G T A C T G A C G T 1e-8-1.858e+010.80%0.01%44.9bp (39.4bp)PB0138.1_Irf4_2/Jaspar(0.619)
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motif file (matrix)
22 * A C T G T G A C C T G A A G C T G T C A T C A G G T A C G A C T 1e-8-1.842e+0129.44%19.95%53.3bp (64.5bp)ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer(0.624)
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motif file (matrix)
23 * T G A C G C T A G A C T G T A C A T G C A C G T T C A G G A C T 1e-7-1.827e+0110.56%4.97%55.8bp (61.9bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.869)
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motif file (matrix)
24 * C G T A A C G T C G T A C G T A C G T A A C G T T A G C T C A G T A G C A G T C 1e-7-1.815e+011.60%0.13%59.6bp (62.1bp)Hoxc9/MA0485.1/Jaspar(0.777)
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motif file (matrix)
25 * A C T G C T A G G T A C A T G C A G T C G A C T C G T A A C T G C A T G C G T A 1e-7-1.788e+015.44%1.78%56.1bp (56.5bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.598)
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motif file (matrix)
26 * A C T G A T C G A G T C A G C T A C T G G T A C C T A G A C T G C G T A C G T A C T A G A C T G 1e-7-1.787e+011.28%0.07%67.1bp (65.0bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.645)
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motif file (matrix)
27 * A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A 1e-7-1.624e+010.64%0.01%33.5bp (68.2bp)PB0044.1_Mtf1_1/Jaspar(0.662)
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motif file (matrix)
28 * A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C G T C G T A A G T C 1e-5-1.349e+010.64%0.01%44.0bp (43.0bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.711)
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motif file (matrix)
29 * A C G T A C T G C G T A A C T G A G T C A C G T A G T C A G T C A C T G C G T A 1e-4-1.078e+010.64%0.03%45.4bp (62.3bp)POL013.1_MED-1/Jaspar(0.719)
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motif file (matrix)
30 * T G A C T G A C T A G C T G A C A T G C T A G C T G A C T G A C T G A C G T A C 1e-4-1.063e+0111.84%7.23%48.7bp (57.4bp)PB0097.1_Zfp281_1/Jaspar(0.901)
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motif file (matrix)
31 * A C G T A C T G C G A T A C T G A C G T C T A G G A T C A C G T C A G T A C G T 1e-3-8.991e+007.68%4.34%58.6bp (61.9bp)PB0208.1_Zscan4_2/Jaspar(0.772)
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motif file (matrix)
32 * C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A 1e0-2.105e+003.84%2.96%55.5bp (50.8bp)PB0130.1_Gm397_2/Jaspar(0.653)
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motif file (matrix)