Homer de novo Motif Results (N2_hfd_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4602
Total background sequences = 44722
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G G T A C A G T C G T C A A G C T A G T C G C A T T C G A T A C G G A C T A C T G C T A G 1e-66-1.537e+023.91%0.77%49.3bp (57.7bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.914)
More Information | Similar Motifs Found
motif file (matrix)
2 C T A G C T G A A C T G A G T C A G T C C G T A C G T A C T A G 1e-40-9.251e+0139.42%30.16%55.8bp (61.2bp)NFIX/MA0671.1/Jaspar(0.905)
More Information | Similar Motifs Found
motif file (matrix)
3 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G 1e-38-8.857e+0119.99%13.08%54.3bp (59.9bp)BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer(0.983)
More Information | Similar Motifs Found
motif file (matrix)
4 T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A 1e-26-6.123e+0114.99%9.93%55.5bp (58.8bp)Hand1::Tcf3/MA0092.1/Jaspar(0.741)
More Information | Similar Motifs Found
motif file (matrix)
5 G C T A C T G A G A T C C T G A A C G T G A C T A G T C A T G C 1e-25-5.985e+0145.07%37.39%56.4bp (61.3bp)TEAD2/MA1121.1/Jaspar(0.880)
More Information | Similar Motifs Found
motif file (matrix)
6 G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A 1e-25-5.933e+0125.25%18.90%54.7bp (61.5bp)Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.790)
More Information | Similar Motifs Found
motif file (matrix)
7 A C T G C T A G A C T G A C T G G T A C A C T G A C T G C T A G C A T G G A T C G A T C C A G T 1e-25-5.884e+0125.60%19.23%54.0bp (55.7bp)Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer(0.970)
More Information | Similar Motifs Found
motif file (matrix)
8 A C T G A C T G T A G C C G A T A C T G A C G T A G T C C G A T A T C G A T G C T A G C T G C A 1e-24-5.542e+012.72%0.93%55.1bp (57.4bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.821)
More Information | Similar Motifs Found
motif file (matrix)
9 T A C G C G A T C A T G C G T A C G A T C G A T C G A T C T G A C G A T A T C G 1e-23-5.517e+012.17%0.64%62.4bp (62.4bp)Hoxc9/MA0485.1/Jaspar(0.888)
More Information | Similar Motifs Found
motif file (matrix)
10 G A T C A G C T G A C T T C A G A C T G T G C A C T G A T C G A A T G C C A T G 1e-21-4.919e+0158.87%51.81%55.7bp (60.7bp)PB0160.1_Rfxdc2_2/Jaspar(0.733)
More Information | Similar Motifs Found
motif file (matrix)
11 T G C A C G T A A T G C G T C A A T G C C G A T A T C G A C G T A T C G A C G T A C G T A G T C 1e-20-4.628e+011.61%0.43%53.3bp (56.7bp)ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer(0.840)
More Information | Similar Motifs Found
motif file (matrix)
12 C G A T A T C G T C G A G A T C C T A G C G A T T G C A G C T A C A G T T A G C 1e-17-4.046e+015.24%2.86%55.8bp (57.3bp)FOSL2::JUN(var.2)/MA1131.1/Jaspar(0.862)
More Information | Similar Motifs Found
motif file (matrix)
13 T C G A C T G A T A G C G A T C T A C G C T A G G T C A T G C A C T A G C A G T 1e-17-4.003e+017.15%4.33%58.8bp (56.6bp)ETS(ETS)/Promoter/Homer(0.962)
More Information | Similar Motifs Found
motif file (matrix)
14 C T G A C T A G A G C T T A G C G C T A A T G C A T C G A G T C 1e-16-3.833e+0126.34%21.14%56.6bp (60.0bp)PAX5/MA0014.3/Jaspar(0.839)
More Information | Similar Motifs Found
motif file (matrix)
15 A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A 1e-16-3.795e+010.22%0.00%39.2bp (0.0bp)PB0048.1_Nkx3-1_1/Jaspar(0.565)
More Information | Similar Motifs Found
motif file (matrix)
16 A T G C A C T G T G A C A C T G G T A C G C T A G A C T A G C T A C G T A T C G G T C A A T G C 1e-14-3.245e+010.39%0.03%42.4bp (64.8bp)PB0008.1_E2F2_1/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
17 G A C T A G C T G A T C G T A C C G T A C T G A C T G A C G T A A G T C C G T A T A G C C G T A 1e-13-3.129e+010.46%0.05%45.5bp (70.0bp)PB0121.1_Foxj3_2/Jaspar(0.730)
More Information | Similar Motifs Found
motif file (matrix)
18 T A C G G T C A A T C G A T G C C G T A A T C G G T C A A T C G A G T C A G T C 1e-12-2.893e+015.52%3.42%50.6bp (62.1bp)ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer(0.613)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C T A G G A C T C T G A G T A C C T G A G A C T G C A T 1e-11-2.722e+0110.47%7.60%59.1bp (61.3bp)PB0075.1_Sp100_1/Jaspar(0.726)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G C T A G A T C G A T C G G T A C A G T C A C G T A C G T C G T A C T G A 1e-11-2.576e+010.70%0.15%55.6bp (53.2bp)LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer(0.683)
More Information | Similar Motifs Found
motif file (matrix)
21 * G T A C C G A T C T G A C A T G A T G C A T C G A T C G C G A T 1e-10-2.464e+0114.21%11.04%56.1bp (63.0bp)PB0046.1_Mybl1_1/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G A G T C C G T A A C T G A G T C A C T G C G T A A G T C C G T A A C G T 1e-10-2.454e+010.15%0.00%58.2bp (51.9bp)ZBED1/MA0749.1/Jaspar(0.606)
More Information | Similar Motifs Found
motif file (matrix)
23 * T A G C A G T C C G T A T A C G A T C G T A G C A G C T A C G T A G T C T C A G T A G C C T G A 1e-10-2.328e+014.61%2.89%55.9bp (60.2bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.625)
More Information | Similar Motifs Found
motif file (matrix)
24 * A T C G A G T C A C G T A G T C C T G A C G A T C G T A C G T A C G T A A C T G 1e-9-2.184e+010.39%0.06%67.2bp (58.0bp)PH0068.1_Hoxc13/Jaspar(0.783)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C A C T G A G T C C G T A C G T A A C T G A G T C A C T G A G T C C G T A C T A G A C G T 1e-8-1.978e+010.15%0.01%60.9bp (23.8bp)NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer(0.794)
More Information | Similar Motifs Found
motif file (matrix)
26 * C T G A G T C A G C T A G T A C C G T A G T A C T G C A T A G C C T G A A G T C 1e-7-1.821e+0142.39%38.36%56.8bp (59.0bp)FOXD2/MA0847.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G 1e-7-1.624e+010.13%0.01%41.6bp (22.9bp)PB0120.1_Foxj1_2/Jaspar(0.561)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G A C G T A C T G T G C A A C T G A G T C A C G T G T A C C T G A A C G T 1e-6-1.555e+010.39%0.09%42.5bp (47.2bp)JUND(var.2)/MA0492.1/Jaspar(0.657)
More Information | Similar Motifs Found
motif file (matrix)
29 * C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T 1e-6-1.510e+010.15%0.01%45.0bp (40.0bp)PB0169.1_Sox15_2/Jaspar(0.751)
More Information | Similar Motifs Found
motif file (matrix)
30 * A G T C A G T C A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C 1e-5-1.226e+010.13%0.01%32.9bp (58.2bp)SPDEF/MA0686.1/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)
31 * A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G 1e-3-8.449e+000.13%0.02%54.0bp (54.3bp)REST/MA0138.2/Jaspar(0.679)
More Information | Similar Motifs Found
motif file (matrix)