Homer de novo Motif Results (TC_hfd_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1018
Total background sequences = 47653
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G 1e-97-2.253e+0212.59%0.93%47.7bp (60.3bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.900)
More Information | Similar Motifs Found
motif file (matrix)
2 C G T A A G C T A G C T A C G T T C A G C T A G G T A C G C T A 1e-31-7.283e+0135.50%19.61%54.1bp (65.6bp)NFIX/MA0671.1/Jaspar(0.929)
More Information | Similar Motifs Found
motif file (matrix)
3 G A T C G C T A C G A T T A G C C G A T C T A G A T C G T C G A C G T A T G C A G T C A C T G A 1e-19-4.484e+015.70%1.30%55.6bp (63.7bp)NFATC2/MA0152.1/Jaspar(0.783)
More Information | Similar Motifs Found
motif file (matrix)
4 G C T A A T C G G A T C T C A G A G T C A G T C G A T C A G T C T A G C C G A T 1e-19-4.418e+013.74%0.54%48.3bp (61.6bp)CTCFL/MA1102.1/Jaspar(0.745)
More Information | Similar Motifs Found
motif file (matrix)
5 C G T A G C T A G C T A T G C A T A G C C G T A C A T G G T A C G A C T T A C G 1e-17-4.054e+0117.01%8.49%53.4bp (64.3bp)MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.875)
More Information | Similar Motifs Found
motif file (matrix)
6 G A C T A G C T A G C T A G T C G T A C G C T A C G A T C T G A A C T G G T A C 1e-14-3.347e+015.01%1.33%48.1bp (62.8bp)NFAT5/MA0606.1/Jaspar(0.774)
More Information | Similar Motifs Found
motif file (matrix)
7 C T A G A T C G G T A C G C A T A C T G A C G T C T G A T G C A C G T A G C A T 1e-14-3.230e+0151.23%39.31%55.1bp (62.9bp)PH0158.1_Rhox11_2/Jaspar(0.768)
More Information | Similar Motifs Found
motif file (matrix)
8 C G T A T C A G A C T G T C A G G T C A C G T A G T A C G C T A C T A G A G C T 1e-13-3.216e+0121.34%12.68%55.3bp (61.9bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.756)
More Information | Similar Motifs Found
motif file (matrix)
9 C G A T A C T G C T A G C T A G G A T C A C G T C A G T A C T G A T G C G A T C G T C A T C G A 1e-13-3.182e+019.14%3.78%50.8bp (65.8bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.701)
More Information | Similar Motifs Found
motif file (matrix)
10 A G C T A C G T A G T C A G T C G A T C C A G T A T G C G T A C G C A T C T A G G T A C C G T A 1e-13-3.057e+015.21%1.54%47.5bp (61.2bp)E2F6/MA0471.1/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
11 C T G A A T G C C G T A C T A G G A T C C G T A A T C G C G T A C T A G T C G A T C A G T G A C 1e-12-2.977e+015.60%1.78%49.7bp (67.8bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.671)
More Information | Similar Motifs Found
motif file (matrix)
12 A G T C A C G T C G T A A C G T C T A G C G T A C G T A C G T A A G C T C G T A A C G T A T G C 1e-12-2.970e+010.59%0.00%53.8bp (13.7bp)PB0148.1_Mtf1_2/Jaspar(0.700)
More Information | Similar Motifs Found
motif file (matrix)
13 T C G A A C G T C T A G C T G A G T C A C G A T G C T A G T C A C G A T A C T G 1e-12-2.829e+017.08%2.71%56.5bp (61.1bp)FOSL1::JUND/MA1142.1/Jaspar(0.777)
More Information | Similar Motifs Found
motif file (matrix)
14 A C G T A G T C A G T C A G T C C T A G A C G T A G T C C G A T A C T G A C T G 1e-12-2.767e+012.36%0.36%50.1bp (60.6bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.799)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T C G T A C T G A C T G A A C T G C T A G C G T A C G T A A C T G A T G C G A T C A G T C 1e-11-2.734e+011.38%0.09%48.7bp (54.2bp)SPIB/MA0081.1/Jaspar(0.594)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G C T C A G T A T G C G C T A A C G T C A T G C G T A C G T A A T C G A G C T T C G A C G T A 1e-11-2.573e+011.77%0.20%58.9bp (60.3bp)Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer(0.621)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A C G A T C G T A G C T A C T G A T A G C T G A C T A C G 1e-10-2.468e+0123.50%15.51%56.7bp (63.7bp)CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer(0.715)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A T G C G T A C A C G T A G C T G T C A A G T C A C G T A C T G A C G T A C T G C G T A 1e-10-2.406e+010.49%0.00%29.2bp (55.0bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.643)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G C T C G A T A C T G A C T G C G T A C G T A T G C A A C G T T C A G A C G T A T C G A G C T 1e-10-2.305e+011.08%0.06%60.0bp (44.3bp)NFATC2/MA0152.1/Jaspar(0.645)
More Information | Similar Motifs Found
motif file (matrix)
20 * T C G A T G A C C G A T C T G A G T C A A C G T C T A G T A C G C G T A G T C A C G T A G C A T 1e-9-2.282e+011.77%0.24%46.0bp (64.3bp)NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.741)
More Information | Similar Motifs Found
motif file (matrix)
21 * G T A C C G T A A C T G A T G C G T C A A C G T A G C T A G C T A G T C G T C A T G A C G T C A 1e-9-2.278e+018.65%4.13%53.1bp (63.7bp)Mafb/MA0117.2/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
22 * C A T G T C A G G T C A A T G C C A G T A C T G G A T C A G C T C G A T G A C T 1e-9-2.276e+0113.67%7.81%55.1bp (63.3bp)GRHL2/MA1105.1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
23 * A T G C G C T A G A C T G A C T A C G T A G T C G C A T C T G A T C A G G C T A 1e-9-2.191e+015.51%2.13%59.7bp (61.1bp)Bcl6/MA0463.1/Jaspar(0.676)
More Information | Similar Motifs Found
motif file (matrix)
24 * T A G C T C G A A C G T A G T C C G T A A C T G C G T A A G T C A C G T C G T A 1e-9-2.158e+015.90%2.39%58.4bp (61.1bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.772)
More Information | Similar Motifs Found
motif file (matrix)
25 * A T G C T G A C A C T G A T G C C G T A A T C G A C T G C G T A A C G T A C T G 1e-9-2.148e+012.26%0.44%50.6bp (60.7bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.670)
More Information | Similar Motifs Found
motif file (matrix)
26 * G A C T T C G A A G T C A G T C C G T A C A G T A C T G C A T G G T A C G T C A C T G A A T G C 1e-9-2.095e+012.26%0.46%53.2bp (60.1bp)Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.905)
More Information | Similar Motifs Found
motif file (matrix)
27 * C A T G C G A T T G A C A G T C G T C A C T G A T G A C C G A T A C T G C G T A 1e-8-2.061e+012.26%0.46%57.3bp (62.2bp)MYB/MA0100.3/Jaspar(0.792)
More Information | Similar Motifs Found
motif file (matrix)
28 * T C A G A T G C G A C T G T A C A T G C A C G T G T A C A G T C A G T C T G A C 1e-7-1.797e+019.83%5.45%51.1bp (61.4bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.814)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C G T A T C G G C T A C G T A G T C A C G A T A G C T A C T G A C T G G C T A 1e-7-1.699e+012.06%0.48%49.4bp (67.7bp)MSX1/MA0666.1/Jaspar(0.720)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C T G A G T C A T C G G C T A A C T G G T A C A T G C C G T A A T C G A T G C 1e-7-1.699e+012.06%0.48%58.7bp (64.1bp)Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer(0.659)
More Information | Similar Motifs Found
motif file (matrix)
31 * A T G C C G T A A G T C A C T G A C G T C G T A C G T A A G T C 1e-7-1.693e+011.67%0.31%43.5bp (56.8bp)GMEB2/MA0862.1/Jaspar(0.784)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C T G A T G C A C T G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A G T C C G A T 1e-7-1.637e+010.69%0.04%58.5bp (50.6bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.614)
More Information | Similar Motifs Found
motif file (matrix)
33 * C T G A G T A C C G T A A T G C G T C A A G T C G T C A A G T C A G T C A G T C C G T A A T G C 1e-6-1.566e+011.28%0.19%41.8bp (51.9bp)KLF9/MA1107.1/Jaspar(0.779)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C T G A C T G A G T C A C G T A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C T G 1e-1-3.859e+000.10%0.00%33.2bp (0.0bp)Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer(0.783)
More Information | Similar Motifs Found
motif file (matrix)