Homer de novo Motif Results (Jurkat_CD3_vs_CTL_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 394
Total background sequences = 49088
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * C G T A A G T C G C T A A C G T A C T G G A T C A G T C G T A C C G A T C T G A 1e-11-2.624e+0110.91%3.18%45.3bp (66.2bp)SNAI2/MA0745.1/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
2 * C T A G A G T C G T A C C G T A C G T A G T C A G A C T G T A C G A T C C A T G A C G T A G T C 1e-10-2.360e+014.06%0.44%45.8bp (63.4bp)NFIX/MA0671.1/Jaspar(0.630)
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motif file (matrix)
3 * A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G 1e-9-2.224e+011.78%0.04%57.0bp (49.5bp)ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer(0.600)
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motif file (matrix)
4 * A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G 1e-9-2.101e+016.09%1.29%54.9bp (65.3bp)SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer(0.698)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T G T C A C G T A G A T C C T A G A C T G A C T G T C A G C G T A C T A G A G T C C G T A 1e-9-2.086e+012.03%0.07%68.9bp (49.8bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.679)
More Information | Similar Motifs Found
motif file (matrix)
6 * C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G 1e-8-2.010e+014.06%0.57%44.2bp (69.2bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.758)
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motif file (matrix)
7 * C G T A A C T G C G T A A C T G A G T C A G T C C G T A C G T A C G T A A G T C A C G T C G T A 1e-8-2.002e+011.27%0.01%37.5bp (42.6bp)NFIX/MA0671.1/Jaspar(0.627)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C A T C G A C T G A C G T A C T G 1e-8-1.973e+011.02%0.01%67.8bp (42.6bp)Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer(0.675)
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motif file (matrix)
9 * A C G T C T G A A C T G T G C A A T C G T A G C G T C A G T C A C T A G A C T G 1e-8-1.968e+015.08%0.96%44.1bp (67.8bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.652)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T 1e-8-1.925e+011.27%0.02%36.1bp (37.6bp)Smad4/MA1153.1/Jaspar(0.734)
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motif file (matrix)
11 * G C T A G A T C A C G T A C T G C G A T A C T G T A G C C G T A T C A G G T A C 1e-8-1.908e+014.31%0.70%50.0bp (73.4bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
12 * G C T A G T C A C G T A A C G T A C G T G A T C A C G T T C G A C G A T A G C T 1e-8-1.866e+014.31%0.72%50.3bp (55.4bp)PH0075.1_Hoxd10/Jaspar(0.714)
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motif file (matrix)
13 * A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A 1e-7-1.822e+012.54%0.20%52.6bp (62.2bp)PB0195.1_Zbtb3_2/Jaspar(0.676)
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motif file (matrix)
14 * A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A 1e-6-1.567e+0116.24%8.23%56.3bp (67.1bp)GCM1/MA0646.1/Jaspar(0.644)
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motif file (matrix)
15 * G A C T A T G C G A T C A C G T A G T C G T A C T A G C C T A G G A C T T C A G 1e-6-1.498e+017.36%2.48%49.7bp (66.4bp)Id2/MA0617.1/Jaspar(0.697)
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motif file (matrix)
16 * C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A 1e-6-1.450e+012.03%0.17%51.3bp (46.6bp)PH0117.1_Nkx3-1/Jaspar(0.680)
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motif file (matrix)
17 * A C G T A C T G A C G T A G T C A C G T C T G A C G T A C G T A A T C G C T A G C T A G A C T G 1e-6-1.421e+010.76%0.01%38.1bp (17.2bp)SMAD3/MA0795.1/Jaspar(0.655)
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motif file (matrix)
18 * T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C 1e-5-1.227e+0114.21%7.57%55.4bp (68.1bp)Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer(0.630)
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motif file (matrix)
19 * A G T C C G T A A G T C A C T G A C G T A C T G A T C G A C G T 1e-5-1.216e+019.14%4.01%61.2bp (70.3bp)MF0007.1_bHLH(zip)_class/Jaspar(0.889)
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motif file (matrix)
20 * T G A C T G C A A G C T A T G C A T C G A G C T A T G C T C G A G A T C A G T C 1e-5-1.213e+017.87%3.19%54.4bp (74.4bp)ESR1/MA0112.3/Jaspar(0.603)
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motif file (matrix)
21 * C T A G C G A T A G C T C T G A G T A C G A C T A G T C C G T A A G C T A G T C 1e-5-1.193e+012.03%0.24%58.7bp (66.9bp)JUND/MA0491.1/Jaspar(0.759)
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motif file (matrix)
22 * A C G T G T A C A G T C A C G T A C G T C G T A A C T G A G T C A G T C G T C A C A T G A C T G 1e-5-1.167e+011.27%0.07%45.0bp (53.2bp)ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer(0.608)
More Information | Similar Motifs Found
motif file (matrix)
23 * G T A C A C G T C G T A A C G T A G T C G T C A A G T C C G T A A C T G C T A G G T C A A G T C 1e-4-1.148e+010.76%0.01%25.9bp (59.3bp)POL009.1_DCE_S_II/Jaspar(0.634)
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motif file (matrix)
24 * A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A 1e-4-1.113e+012.54%0.45%58.6bp (68.4bp)SD0001.1_at_AC_acceptor/Jaspar(0.702)
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motif file (matrix)
25 * G C A T C A G T T G A C C G T A G A C T C G T A A T G C C G T A C G A T C T A G G T A C C G T A 1e-4-1.101e+012.54%0.45%62.3bp (64.8bp)PH0082.1_Irx2/Jaspar(0.692)
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motif file (matrix)
26 * G A T C G T A C G C A T A G T C C G T A C G T A A G C T G T A C A C T G A T C G G T C A A C G T 1e-4-1.035e+010.51%0.00%51.6bp (0.0bp)SPDEF/MA0686.1/Jaspar(0.599)
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motif file (matrix)
27 * A C G T A C T G A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T 1e-4-9.995e+001.27%0.10%28.4bp (71.3bp)PB0099.1_Zfp691_1/Jaspar(0.644)
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motif file (matrix)
28 * A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A 1e-4-9.281e+0011.17%6.10%51.4bp (68.1bp)PRDM1/MA0508.2/Jaspar(0.628)
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motif file (matrix)
29 * C T G A A G C T T A C G T A C G C T G A C T G A A C G T T A C G T A C G C T G A 1e-3-9.084e+002.28%0.46%47.9bp (69.7bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.746)
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motif file (matrix)
30 * C G T A C G T A A G T C C T G A A C T G A C T G C G T A A G C T A G T C C G T A 1e-3-8.859e+001.27%0.12%52.5bp (52.8bp)RHOXF1/MA0719.1/Jaspar(0.702)
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motif file (matrix)
31 * A C T G A C T G C G T A C A G T C T A G A C T G C T G A A C G T C T A G C T A G 1e-3-8.129e+005.58%2.41%44.2bp (77.9bp)HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer(0.735)
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motif file (matrix)
32 * A G T C A C G T A G T C C G T A A T G C C T G A A C G T A C T G A G T C A C G T A G T C C G T A 1e-3-8.051e+000.76%0.03%43.3bp (75.7bp)TFEC/MA0871.1/Jaspar(0.645)
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motif file (matrix)
33 * T A G C G C T A T A G C G C T A T G C A T C G A G A T C G C A T T A G C G T C A T G A C G C T A 1e-3-7.264e+001.78%0.37%47.9bp (84.2bp)ZSCAN4/MA1155.1/Jaspar(0.666)
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motif file (matrix)