| Rank | Motif | P-value | log P-pvalue | % of Targets | % of Background | STD(Bg STD) | Best Match/Details | Motif File |
| 1 | 1e-314 | -7.244e+02 | 21.40% | 14.71% | 55.9bp (62.0bp) | Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.968) More Information | Similar Motifs Found | motif file (matrix) | |
| 2 | 1e-303 | -6.997e+02 | 36.85% | 28.69% | 55.5bp (60.0bp) | NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.896) More Information | Similar Motifs Found | motif file (matrix) | |
| 3 | 1e-260 | -5.994e+02 | 8.01% | 4.32% | 55.2bp (56.9bp) | Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer(0.933) More Information | Similar Motifs Found | motif file (matrix) | |
| 4 | 1e-166 | -3.839e+02 | 47.18% | 40.75% | 55.8bp (59.9bp) | IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.626) More Information | Similar Motifs Found | motif file (matrix) | |
| 5 | 1e-159 | -3.675e+02 | 45.90% | 39.63% | 56.1bp (61.4bp) | SOX10/MA0442.2/Jaspar(0.737) More Information | Similar Motifs Found | motif file (matrix) | |
| 6 | 1e-134 | -3.097e+02 | 33.61% | 28.26% | 55.4bp (59.8bp) | Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer(0.746) More Information | Similar Motifs Found | motif file (matrix) | |
| 7 | 1e-128 | -2.959e+02 | 54.86% | 49.16% | 56.5bp (62.2bp) | BARHL1/MA0877.2/Jaspar(0.690) More Information | Similar Motifs Found | motif file (matrix) | |
| 8 | 1e-128 | -2.950e+02 | 23.19% | 18.63% | 56.1bp (60.9bp) | Crx/MA0467.1/Jaspar(0.693) More Information | Similar Motifs Found | motif file (matrix) | |
| 9 | 1e-116 | -2.685e+02 | 27.16% | 22.53% | 56.6bp (59.8bp) | Nr2e3/MA0164.1/Jaspar(0.653) More Information | Similar Motifs Found | motif file (matrix) | |
| 10 | 1e-111 | -2.557e+02 | 19.04% | 15.12% | 55.5bp (60.3bp) | POL013.1_MED-1/Jaspar(0.647) More Information | Similar Motifs Found | motif file (matrix) | |
| 11 | 1e-108 | -2.506e+02 | 29.14% | 24.54% | 56.5bp (61.4bp) | PB0099.1_Zfp691_1/Jaspar(0.710) More Information | Similar Motifs Found | motif file (matrix) | |
| 12 | 1e-104 | -2.403e+02 | 22.08% | 18.03% | 56.2bp (61.8bp) | OTX1/MA0711.1/Jaspar(0.656) More Information | Similar Motifs Found | motif file (matrix) | |
| 13 | 1e-100 | -2.322e+02 | 24.90% | 20.71% | 55.4bp (59.6bp) | PB0195.1_Zbtb3_2/Jaspar(0.693) More Information | Similar Motifs Found | motif file (matrix) | |
| 14 | 1e-86 | -2.003e+02 | 6.60% | 4.53% | 56.1bp (64.0bp) | Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer(0.763) More Information | Similar Motifs Found | motif file (matrix) | |
| 15 | 1e-81 | -1.887e+02 | 2.30% | 1.19% | 56.7bp (57.7bp) | RFX3/MA0798.2/Jaspar(0.914) More Information | Similar Motifs Found | motif file (matrix) | |
| 16 | 1e-68 | -1.573e+02 | 20.48% | 17.28% | 55.4bp (60.0bp) | NFATC1/MA0624.1/Jaspar(0.760) More Information | Similar Motifs Found | motif file (matrix) | |
| 17 | 1e-64 | -1.489e+02 | 4.14% | 2.73% | 56.9bp (62.1bp) | NFIC/MA0161.2/Jaspar(0.744) More Information | Similar Motifs Found | motif file (matrix) | |
| 18 | 1e-63 | -1.459e+02 | 26.48% | 23.07% | 56.3bp (59.6bp) | NFATC1/MA0624.1/Jaspar(0.781) More Information | Similar Motifs Found | motif file (matrix) | |
| 19 | 1e-63 | -1.458e+02 | 10.13% | 7.90% | 56.1bp (58.8bp) | PB0140.1_Irf6_2/Jaspar(0.660) More Information | Similar Motifs Found | motif file (matrix) | |
| 20 | 1e-46 | -1.067e+02 | 7.39% | 5.75% | 55.6bp (59.4bp) | POL010.1_DCE_S_III/Jaspar(0.718) More Information | Similar Motifs Found | motif file (matrix) | |
| 21 | 1e-42 | -9.711e+01 | 0.17% | 0.02% | 51.6bp (31.8bp) | PH0037.1_Hdx/Jaspar(0.657) More Information | Similar Motifs Found | motif file (matrix) | |
| 22 | 1e-40 | -9.355e+01 | 5.57% | 4.24% | 54.8bp (60.7bp) | FOXH1/MA0479.1/Jaspar(0.679) More Information | Similar Motifs Found | motif file (matrix) | |
| 23 | 1e-39 | -9.181e+01 | 5.54% | 4.23% | 56.0bp (59.5bp) | BARHL2/MA0635.1/Jaspar(0.689) More Information | Similar Motifs Found | motif file (matrix) | |
| 24 | 1e-32 | -7.475e+01 | 6.27% | 4.99% | 56.0bp (54.8bp) | PB0156.1_Plagl1_2/Jaspar(0.802) More Information | Similar Motifs Found | motif file (matrix) | |
| 25 | 1e-27 | -6.365e+01 | 0.07% | 0.01% | 52.7bp (48.9bp) | Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer(0.658) More Information | Similar Motifs Found | motif file (matrix) | |
| 26 | 1e-26 | -6.086e+01 | 0.07% | 0.01% | 60.8bp (0.0bp) | NKX2-2/MA1645.1/Jaspar(0.707) More Information | Similar Motifs Found | motif file (matrix) | |
| 27 | 1e-17 | -4.064e+01 | 0.07% | 0.01% | 55.0bp (24.5bp) | NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer(0.669) More Information | Similar Motifs Found | motif file (matrix) | |
| 28 | 1e-14 | -3.444e+01 | 0.09% | 0.02% | 58.2bp (54.4bp) | OTX2/MA0712.2/Jaspar(0.633) More Information | Similar Motifs Found | motif file (matrix) | |
| 29 | 1e-14 | -3.308e+01 | 0.06% | 0.01% | 57.5bp (52.6bp) | Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.751) More Information | Similar Motifs Found | motif file (matrix) | |
| 30 | 1e-13 | -3.102e+01 | 0.13% | 0.04% | 55.5bp (41.2bp) | MEIS2/MA0774.1/Jaspar(0.761) More Information | Similar Motifs Found | motif file (matrix) | |
| 31 | 1e-12 | -2.872e+01 | 0.06% | 0.01% | 52.0bp (4.4bp) | Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.691) More Information | Similar Motifs Found | motif file (matrix) | |
| 32 * | 1e-11 | -2.718e+01 | 0.10% | 0.03% | 61.3bp (14.3bp) | SCRT1/MA0743.2/Jaspar(0.641) More Information | Similar Motifs Found | motif file (matrix) |