Homer de novo Motif Results (e15_satb2wt_rah3k4me1_out/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 44879
Total background sequences = 44189
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C 1e-314-7.244e+0221.40%14.71%55.9bp (62.0bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.968)
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motif file (matrix)
2 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A 1e-303-6.997e+0236.85%28.69%55.5bp (60.0bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.896)
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motif file (matrix)
3 T G A C G T A C T G C A A G C T G T A C A G C T A C T G A G C T A C G T G A T C 1e-260-5.994e+028.01%4.32%55.2bp (56.9bp)Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer(0.933)
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motif file (matrix)
4 T A C G A C T G A T C G C A G T C A T G C G T A G T C A C G T A 1e-166-3.839e+0247.18%40.75%55.8bp (59.9bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.626)
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motif file (matrix)
5 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C 1e-159-3.675e+0245.90%39.63%56.1bp (61.4bp)SOX10/MA0442.2/Jaspar(0.737)
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motif file (matrix)
6 G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A 1e-134-3.097e+0233.61%28.26%55.4bp (59.8bp)Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer(0.746)
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motif file (matrix)
7 G A T C A C T G A G T C C T A G G A C T C G A T G C T A G C T A 1e-128-2.959e+0254.86%49.16%56.5bp (62.2bp)BARHL1/MA0877.2/Jaspar(0.690)
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motif file (matrix)
8 C T G A C T G A T C A G A G T C G T A C A T C G T G A C G A C T A G C T A G C T 1e-128-2.950e+0223.19%18.63%56.1bp (60.9bp)Crx/MA0467.1/Jaspar(0.693)
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motif file (matrix)
9 T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G 1e-116-2.685e+0227.16%22.53%56.6bp (59.8bp)Nr2e3/MA0164.1/Jaspar(0.653)
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motif file (matrix)
10 T A C G T C G A G T C A C G T A T A C G C T A G T A C G C T G A T A C G A G T C 1e-111-2.557e+0219.04%15.12%55.5bp (60.3bp)POL013.1_MED-1/Jaspar(0.647)
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motif file (matrix)
11 A T C G A G T C C G T A A T G C A C G T A T C G G C A T C A G T 1e-108-2.506e+0229.14%24.54%56.5bp (61.4bp)PB0099.1_Zfp691_1/Jaspar(0.710)
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motif file (matrix)
12 T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T 1e-104-2.403e+0222.08%18.03%56.2bp (61.8bp)OTX1/MA0711.1/Jaspar(0.656)
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motif file (matrix)
13 C T G A C T G A C G A T A T G C G T C A A T G C G C A T A G T C A T C G A T G C 1e-100-2.322e+0224.90%20.71%55.4bp (59.6bp)PB0195.1_Zbtb3_2/Jaspar(0.693)
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motif file (matrix)
14 T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T 1e-86-2.003e+026.60%4.53%56.1bp (64.0bp)Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer(0.763)
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motif file (matrix)
15 G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C 1e-81-1.887e+022.30%1.19%56.7bp (57.7bp)RFX3/MA0798.2/Jaspar(0.914)
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motif file (matrix)
16 C G T A C G A T C G A T C G A T G A T C A T G C G A T C A C G T 1e-68-1.573e+0220.48%17.28%55.4bp (60.0bp)NFATC1/MA0624.1/Jaspar(0.760)
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motif file (matrix)
17 G T A C G C A T A T C G T G A C G T A C G T C A C T G A T C A G T G A C C G T A T A C G T C G A 1e-64-1.489e+024.14%2.73%56.9bp (62.1bp)NFIC/MA0161.2/Jaspar(0.744)
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motif file (matrix)
18 A C T G C G A T G A C T C G A T T G A C T A G C C A T G G C T A 1e-63-1.459e+0226.48%23.07%56.3bp (59.6bp)NFATC1/MA0624.1/Jaspar(0.781)
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motif file (matrix)
19 T G A C T G A C A C T G C T A G T A C G C T G A C A T G T C G A T G C A A G C T 1e-63-1.458e+0210.13%7.90%56.1bp (58.8bp)PB0140.1_Irf6_2/Jaspar(0.660)
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motif file (matrix)
20 C T G A G A C T T C G A T G A C G T C A C T A G A G T C T G A C 1e-46-1.067e+027.39%5.75%55.6bp (59.4bp)POL010.1_DCE_S_III/Jaspar(0.718)
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motif file (matrix)
21 A G T C G C T A C T A G C G A T T A C G A C G T T G C A C T G A T C G A C A G T T A G C G C T A 1e-42-9.711e+010.17%0.02%51.6bp (31.8bp)PH0037.1_Hdx/Jaspar(0.657)
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motif file (matrix)
22 C G T A C A T G T G A C G C A T A C T G C A G T A C T G G T A C G C T A A G C T A G C T A G C T 1e-40-9.355e+015.57%4.24%54.8bp (60.7bp)FOXH1/MA0479.1/Jaspar(0.679)
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motif file (matrix)
23 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T 1e-39-9.181e+015.54%4.23%56.0bp (59.5bp)BARHL2/MA0635.1/Jaspar(0.689)
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motif file (matrix)
24 A C T G C T A G A C T G A C T G A C T G A C G T C T G A C T A G 1e-32-7.475e+016.27%4.99%56.0bp (54.8bp)PB0156.1_Plagl1_2/Jaspar(0.802)
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motif file (matrix)
25 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C 1e-27-6.365e+010.07%0.01%52.7bp (48.9bp)Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer(0.658)
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motif file (matrix)
26 A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T 1e-26-6.086e+010.07%0.01%60.8bp (0.0bp)NKX2-2/MA1645.1/Jaspar(0.707)
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motif file (matrix)
27 A C T G T A G C C A T G A T C G A G C T T C A G T C A G G C T A C T G A A C G T A G T C G A T C 1e-17-4.064e+010.07%0.01%55.0bp (24.5bp)NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer(0.669)
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motif file (matrix)
28 G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A 1e-14-3.444e+010.09%0.02%58.2bp (54.4bp)OTX2/MA0712.2/Jaspar(0.633)
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motif file (matrix)
29 A G T C A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A C T G 1e-14-3.308e+010.06%0.01%57.5bp (52.6bp)Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.751)
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motif file (matrix)
30 A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C T G A G T C A G T C A G T C 1e-13-3.102e+010.13%0.04%55.5bp (41.2bp)MEIS2/MA0774.1/Jaspar(0.761)
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motif file (matrix)
31 C G T A A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C G T A G T C A C T G A C G T 1e-12-2.872e+010.06%0.01%52.0bp (4.4bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.691)
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motif file (matrix)
32 * C G T A T G C A G C A T G A T C G T C A A G T C G T A C G C A T A G C T C G A T C A T G T A C G 1e-11-2.718e+010.10%0.03%61.3bp (14.3bp)SCRT1/MA0743.2/Jaspar(0.641)
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motif file (matrix)