Homer de novo Motif Results (VEP_con_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 896
Total background sequences = 48677
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C A G T C C G T A A T G C A G T C C T G A A C T G C T G A A C G T A C T G A C T G G T A C 1e-36-8.416e+014.24%0.20%46.6bp (53.9bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.880)
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motif file (matrix)
2 C T G A A G C T A C G T A C G T A G T C A G T C A C G T C A T G 1e-31-7.325e+0127.34%12.55%52.7bp (61.4bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.977)
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motif file (matrix)
3 A T G C C G T A A C T G G T A C A G C T C A T G A G T C A G C T T A G C A G C T 1e-16-3.838e+0129.91%18.28%52.2bp (63.5bp)Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer(0.966)
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motif file (matrix)
4 C T G A C G T A C G T A T A G C G T C A G T C A A G C T A C T G A T G C C G T A T A C G T G A C 1e-15-3.592e+011.90%0.10%56.6bp (62.9bp)Sox5/MA0087.1/Jaspar(0.714)
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motif file (matrix)
5 * T A G C C T G A G C A T A C T G A T C G C T G A C T G A C G T A C T G A G A T C 1e-11-2.761e+013.35%0.65%48.8bp (61.4bp)NFAT5/MA0606.1/Jaspar(0.877)
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motif file (matrix)
6 * C G A T A T G C G C A T T A G C G T A C C G T A A C T G C T G A T A G C C T G A A G T C C G A T 1e-11-2.757e+014.46%1.15%48.0bp (59.0bp)PB0060.1_Smad3_1/Jaspar(0.607)
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motif file (matrix)
7 * C G T A C G T A A C T G A G T C G A T C G C A T A C G T A G C T C T A G G C A T 1e-11-2.712e+013.68%0.81%57.3bp (58.8bp)Sox2/MA0143.3/Jaspar(0.795)
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motif file (matrix)
8 * C T G A A C T G T G A C G T C A T C G A C G T A C A T G A C T G T C G A C T G A G T A C G C T A 1e-11-2.632e+014.02%0.98%61.3bp (64.1bp)PB0084.1_Tcf7l2_1/Jaspar(0.639)
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motif file (matrix)
9 * G A T C C G T A T G A C C T G A A C G T G A C T T G A C A G T C C G A T A G T C 1e-10-2.333e+0111.38%5.74%57.2bp (59.3bp)TEAD1/MA0090.2/Jaspar(0.858)
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motif file (matrix)
10 * C A T G C A G T C G T A C T A G C G T A A C T G T G A C A G T C C G T A C G T A 1e-9-2.248e+012.57%0.48%63.6bp (58.3bp)NFIX/MA0671.1/Jaspar(0.686)
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motif file (matrix)
11 * A G C T A T C G G T C A A T C G A T G C T G A C A G C T C A T G C A G T G T C A 1e-8-2.058e+016.47%2.66%56.1bp (58.4bp)Esrra/MA0592.2/Jaspar(0.579)
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motif file (matrix)
12 * C T A G A T C G A C T G A T G C G T A C G T A C A C G T C T A G C G T A G T C A 1e-8-2.037e+016.25%2.53%56.3bp (61.5bp)Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer(0.740)
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motif file (matrix)
13 * A C G T A G C T A C T G A C T G A G T C G T C A A T C G A T C G 1e-8-1.937e+016.47%2.75%57.4bp (61.2bp)NFIA/MA0670.1/Jaspar(0.880)
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motif file (matrix)
14 * A G T C C T G A C G A T A G T C G T A C C G A T C T A G A C G T A C G T A C G T 1e-8-1.924e+011.90%0.30%51.7bp (61.0bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.772)
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motif file (matrix)
15 * C G T A C G T A C G T A A C T G A C G T A G C T C G A T A C T G C A T G A G C T G C T A C G T A 1e-8-1.918e+010.45%0.00%51.0bp (16.4bp)RORA(var.2)/MA0072.1/Jaspar(0.646)
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motif file (matrix)
16 * C G T A C T G A G A C T G T C A C G A T A C T G A C T G A G T C C A T G C G T A C T A G C T G A 1e-8-1.900e+010.67%0.02%55.7bp (53.9bp)Arid5a/MA0602.1/Jaspar(0.660)
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motif file (matrix)
17 * A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G C G T A A T G C 1e-7-1.790e+010.56%0.01%68.4bp (67.0bp)NKX3-2/MA0122.2/Jaspar(0.773)
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motif file (matrix)
18 * A G T C A C G T A T C G A C T G A G T C A G C T A G T C A G T C A G C T A T G C A C G T A G T C 1e-7-1.762e+011.00%0.07%43.8bp (48.7bp)Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer(0.688)
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motif file (matrix)
19 * A C G T A G C T C T G A A C T G G T C A C G T A A C T G A G T C C G T A C G A T 1e-7-1.742e+018.48%4.30%51.8bp (60.4bp)Nr2e3/MA0164.1/Jaspar(0.601)
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motif file (matrix)
20 * C T A G A G C T A C G T A C G T A G T C A C G T A T G C C G T A A G C T C G A T A C G T A C G T 1e-7-1.695e+010.78%0.04%54.6bp (69.9bp)PB0148.1_Mtf1_2/Jaspar(0.630)
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motif file (matrix)
21 * A C G T A C T G C G A T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A G T C A G C T 1e-6-1.538e+010.67%0.03%44.6bp (52.2bp)PB0122.1_Foxk1_2/Jaspar(0.712)
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motif file (matrix)
22 * A C G T A T G C C G A T C G T A A G C T A G T C A C G T A C T G C G T A A C T G C G T A A C T G 1e-5-1.379e+010.33%0.00%55.3bp (30.0bp)PB0138.1_Irf4_2/Jaspar(0.589)
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motif file (matrix)
23 * C A T G A G C T A G T C C G T A A C G T C A T G A C T G C G A T A C T G C G A T A C T G A C T G 1e-5-1.290e+010.67%0.04%54.7bp (60.1bp)KLF4/MA0039.3/Jaspar(0.672)
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motif file (matrix)
24 * A T C G T A G C G A T C T G C A C A G T A C T G T G A C G C A T C T A G C A T G A G T C A G T C 1e-5-1.222e+013.01%1.11%52.6bp (61.6bp)YY1/MA0095.2/Jaspar(0.613)
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motif file (matrix)
25 * A C T G A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C G T A C G T C T G A A C T G 1e-4-1.148e+010.45%0.02%54.0bp (61.3bp)PSE(SNAPc)/K562-mStart-Seq/Homer(0.596)
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motif file (matrix)
26 * C T A G A G T C C T G A A C T G A C T G C T A G A C T G A T C G C G T A C G A T A C T G C G T A 1e-4-1.058e+010.78%0.09%58.3bp (56.6bp)PB0124.1_Gabpa_2/Jaspar(0.689)
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motif file (matrix)
27 * T A G C A G T C G T A C G T A C A T G C A G T C A G T C A G T C T G A C A T G C 1e-4-1.048e+018.37%5.11%55.3bp (56.3bp)Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.910)
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motif file (matrix)
28 * A C T G A C G T A C T G C T A G A C G T T A G C A C G T C G T A 1e-4-1.000e+014.02%1.93%58.8bp (55.3bp)PB0196.1_Zbtb7b_2/Jaspar(0.768)
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motif file (matrix)
29 * C G T A A G T C A C G T A C T G A C G T A C T G C T G A G A C T C T G A A G C T A G T C C G T A 1e-3-7.973e+0012.61%9.14%55.1bp (57.8bp)Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer(0.680)
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motif file (matrix)
30 * A C T G A C T G A G T C A G T C A C T G C G T A C T A G A G T C 1e-3-7.696e+002.12%0.87%51.2bp (58.0bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.820)
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motif file (matrix)
31 * A G C T A T C G G A C T A T C G A G T C A T C G A G T C T C A G A T G C T C A G A G T C T A C G 1e-3-7.136e+001.79%0.70%51.5bp (54.6bp)PB0095.1_Zfp161_1/Jaspar(0.808)
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motif file (matrix)
32 * A C G T A C T G A C G T G T A C A C G T A C T G A C G T C T A G A G T C A C G T 1e-3-7.110e+000.89%0.21%52.2bp (59.4bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.672)
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motif file (matrix)
33 * A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A G T C C G T A 1e-3-6.964e+000.78%0.17%54.3bp (58.1bp)COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer(0.809)
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motif file (matrix)
34 * C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G 1e-2-6.524e+000.22%0.01%60.6bp (56.5bp)PB0138.1_Irf4_2/Jaspar(0.701)
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motif file (matrix)
35 * A G T C A G T C A C G T G T C A C G T A A G T C A G T C A G T C A G T C A C G T C G T A C G T A 1e-2-6.524e+000.22%0.01%31.9bp (24.1bp)PB0118.1_Esrra_2/Jaspar(0.648)
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motif file (matrix)
36 * A G C T T A G C G T A C T A C G T A G C C A T G A C G T G T C A C A T G A T G C 1e-1-4.004e+000.11%0.00%0.0bp (51.0bp)HINFP/MA0131.2/Jaspar(0.637)
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motif file (matrix)