Homer de novo Motif Results (p00_rbsatb2_out/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1095
Total background sequences = 45291
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T A G C T G A C C T G A C G A T G T A C A C G T A C T G A G C T 1e-34-7.983e+0123.47%10.42%56.3bp (59.5bp)NEUROD1/MA1109.1/Jaspar(0.983)
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motif file (matrix)
2 G A C T T G C A C G T A G C A T A C G T T C G A T A C G T G A C 1e-29-6.790e+0125.48%12.72%57.6bp (66.7bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.947)
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motif file (matrix)
3 C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A 1e-21-4.981e+0116.26%7.47%54.0bp (71.4bp)CEBPG/MA0838.1/Jaspar(0.670)
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motif file (matrix)
4 G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A 1e-16-3.909e+0133.79%22.51%56.1bp (61.9bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.820)
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motif file (matrix)
5 C G T A T A G C C G T A T A G C C A T G G T A C C G T A G T C A A C G T A G T C 1e-14-3.349e+011.37%0.07%62.5bp (61.6bp)Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer(0.713)
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motif file (matrix)
6 G T A C T C A G T A G C G T A C G C T A G T C A A C G T A G T C G C T A A G C T 1e-14-3.287e+017.31%2.71%51.6bp (65.9bp)NFYC/MA1644.1/Jaspar(0.710)
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motif file (matrix)
7 A C T G A C T G T A C G A T C G A T C G A C T G C T G A C T G A C G T A T C G A 1e-14-3.248e+0112.60%6.24%50.7bp (64.6bp)E2F6/MA0471.2/Jaspar(0.775)
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motif file (matrix)
8 T G A C G T C A C T A G A T C G A G T C A C G T C A T G A G C T A T G C C G T A 1e-13-3.219e+0117.63%10.01%56.9bp (58.7bp)POL009.1_DCE_S_II/Jaspar(0.738)
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motif file (matrix)
9 T G A C G C A T G C T A A T G C C G T A G T A C C A G T A G C T A G T C A G T C 1e-13-3.205e+013.84%0.89%59.0bp (59.8bp)GFY(?)/Promoter/Homer(0.836)
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motif file (matrix)
10 C A G T A T C G C A T G C G A T A G C T G C A T A T G C A G T C A T C G A G C T 1e-13-3.082e+0110.68%5.03%58.1bp (63.0bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.761)
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motif file (matrix)
11 C G A T A C T G G T A C C G T A A C G T A G C T A G C T A G C T A C G T A C T G C A T G C G T A 1e-13-3.025e+012.65%0.45%58.5bp (65.6bp)ZNF143/MA0088.2/Jaspar(0.634)
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motif file (matrix)
12 T G C A T A C G T A C G A G T C G A C T A G T C G A T C A T C G A G T C A G T C A G T C A G T C 1e-13-3.013e+015.48%1.79%55.2bp (66.8bp)Sp1(Zf)/Promoter/Homer(0.826)
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motif file (matrix)
13 G T A C C G T A A G C T G C T A A C G T C A G T A T C G T C G A C G A T C A G T G C A T A C G T 1e-13-3.011e+018.04%3.32%53.1bp (65.1bp)Bhlha15/MA0607.1/Jaspar(0.719)
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motif file (matrix)
14 A C G T A C T G G T C A C G T A C G A T G T C A A C G T C G A T G T A C C G T A A C G T C A T G 1e-12-2.957e+010.91%0.02%49.5bp (47.9bp)OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer(0.924)
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motif file (matrix)
15 C T A G C T G A C G A T C G T A A G T C C T A G A C G T A T G C A G T C A C G T A G T C A C G T 1e-12-2.957e+010.91%0.02%55.5bp (64.1bp)SPIC/MA0687.1/Jaspar(0.579)
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motif file (matrix)
16 C G T A C A T G C T A G G T A C G C T A G T C A C G A T A C G T C T G A G T C A G T C A T A G C 1e-12-2.863e+012.01%0.26%51.6bp (68.1bp)Hmx1/MA0896.1/Jaspar(0.772)
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motif file (matrix)
17 A C G T A T G C C G A T A T C G T G C A G T C A A C T G A G C T C T A G G T C A 1e-12-2.775e+012.83%0.57%61.2bp (63.9bp)ZNF317/MA1593.1/Jaspar(0.694)
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motif file (matrix)
18 C G A T C A G T A C T G A T C G T G C A G C T A A T G C T C A G 1e-12-2.772e+0116.62%9.72%55.0bp (64.9bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.746)
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motif file (matrix)
19 * A C T G C G T A A C G T A C G T A C G T A C T G A T G C C G T A A C G T A G T C A C G T A C T G 1e-11-2.698e+010.64%0.01%35.8bp (18.2bp)Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer(0.777)
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motif file (matrix)
20 * C T G A A C T G A C G T C A T G G A C T C T A G T C A G C G A T C G T A A C G T A G T C C G A T 1e-11-2.583e+010.82%0.02%40.5bp (34.5bp)PB0126.1_Gata5_2/Jaspar(0.630)
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motif file (matrix)
21 * A C G T A C G T A C T G A G T C A C G T G T C A T C G A A C T G A G T C C G T A C T G A A G T C 1e-10-2.500e+010.73%0.02%54.1bp (61.2bp)Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer(0.818)
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motif file (matrix)
22 * A T C G C G T A A G C T A G T C A C T G A G T C G T C A A G T C A C G T C G T A 1e-10-2.426e+011.19%0.09%46.5bp (63.6bp)CEBPA/MA0102.4/Jaspar(0.594)
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motif file (matrix)
23 * A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G T A A T C G A G T C A G T C A G T C 1e-10-2.344e+010.64%0.01%51.7bp (40.8bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.592)
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motif file (matrix)
24 * C G T A C T A G C G A T G T A C A T C G A G T C C G T A A C T G G T C A A T G C G T C A A G T C 1e-10-2.344e+010.64%0.01%43.5bp (64.5bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.672)
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motif file (matrix)
25 * A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C G T C G T A A C T G A C T G A G T C 1e-10-2.343e+010.46%0.00%62.4bp (0.0bp)POU6F1(var.2)/MA1549.1/Jaspar(0.732)
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motif file (matrix)
26 * A G C T G C A T G C T A T C G A C G A T A C T G C G A T T C A G C G T A A T G C 1e-9-2.202e+012.56%0.59%54.2bp (62.9bp)USF2/MA0526.3/Jaspar(0.695)
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motif file (matrix)
27 * C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A 1e-9-2.201e+0118.63%12.08%53.4bp (68.0bp)Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.698)
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motif file (matrix)
28 * C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C 1e-8-2.045e+012.19%0.47%51.6bp (72.5bp)Arid3a/MA0151.1/Jaspar(0.734)
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motif file (matrix)
29 * T A C G G A T C G A C T A T G C A C T G A C G T A C G T G T C A 1e-8-2.006e+014.93%1.97%52.9bp (66.1bp)HOXA9/MA0594.2/Jaspar(0.754)
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motif file (matrix)
30 * C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C 1e-8-1.990e+011.46%0.21%65.6bp (51.9bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.712)
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motif file (matrix)
31 * A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G 1e-8-1.940e+015.48%2.36%52.0bp (67.0bp)Pax2/MA0067.1/Jaspar(0.723)
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motif file (matrix)
32 * A T G C G A T C A T G C A G T C G A T C G A C T A G T C G A C T A G T C A G C T 1e-8-1.884e+0123.74%16.96%51.1bp (53.2bp)MAZ/MA1522.1/Jaspar(0.749)
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motif file (matrix)
33 * C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G 1e-8-1.848e+019.95%5.62%56.6bp (63.2bp)PB0141.1_Isgf3g_2/Jaspar(0.712)
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motif file (matrix)
34 * A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C 1e-7-1.738e+017.21%3.70%60.9bp (64.6bp)Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer(0.770)
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motif file (matrix)
35 * A C T G A C T G C G T A C G T A A C G T A G T C A C T G C G T A C G T A A G T C A G T C A G T C 1e-6-1.534e+010.37%0.01%52.5bp (21.9bp)PB0035.1_Irf5_1/Jaspar(0.663)
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motif file (matrix)
36 * A C G T A C T G A G T C A G T C A C G T A G T C A T G C A C T G C G T A C G A T 1e-6-1.501e+011.19%0.19%60.5bp (66.4bp)Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer(0.620)
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motif file (matrix)
37 * A C T G A G T C A C G T C G T A A G T C A C T G A C G T A G T C A C G T A G T C 1e-5-1.374e+010.37%0.01%52.6bp (55.2bp)CREB3L4/MA1474.1/Jaspar(0.687)
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motif file (matrix)
38 * C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T 1e-4-1.115e+0181.28%75.97%56.6bp (64.4bp)PB0080.1_Tbp_1/Jaspar(0.812)
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motif file (matrix)
39 * C T A G C T A G T C A G T C G A C G T A C G T A C T G A G T C A C T G A C G T A T G C A G C T A 1e-3-8.690e+003.93%2.15%53.2bp (64.9bp)PB0186.1_Tcf3_2/Jaspar(0.805)
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motif file (matrix)