Homer de novo Motif Results (VCaP_171_vs_Veh_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1616
Total background sequences = 48840
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C G T C G T A G T A C G T A C C G T A C T A G T C A G C G T A T G A C C G T A C A T G T C A G 1e-18-4.229e+013.96%1.03%55.9bp (60.7bp)Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer(0.623)
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motif file (matrix)
2 C A G T C T A G A T C G A G T C C G T A T G A C G T A C A T G C A G T C A G C T 1e-18-4.166e+018.29%3.56%57.7bp (61.8bp)PB0029.1_Hic1_1/Jaspar(0.690)
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motif file (matrix)
3 A C T G A T C G G A C T A C G T C G T A C T G A T C G A G T C A C G A T T A G C 1e-15-3.633e+0110.02%5.01%54.2bp (59.5bp)ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer(0.654)
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motif file (matrix)
4 C A G T C T A G C T G A C G T A A G T C C G T A T G C A C T G A A C T G A G T C A G T C G T C A 1e-15-3.499e+010.80%0.03%38.8bp (71.5bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.733)
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motif file (matrix)
5 A G C T C G T A A G C T A G C T A C G T A C G T C G A T T C A G C T A G A C T G A C G T C G T A 1e-15-3.479e+010.93%0.04%53.0bp (52.4bp)Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer(0.727)
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motif file (matrix)
6 C G T A C G A T C T A G C T A G C A G T A T C G T G C A T G C A G A T C G T C A T G A C C G T A 1e-13-3.087e+012.78%0.71%54.0bp (60.1bp)PB0016.1_Foxj1_1/Jaspar(0.637)
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motif file (matrix)
7 G A T C G C T A G A T C C G A T C A G T T G C A T A G C G A T C G C A T G T A C G C A T A C G T 1e-13-3.021e+012.91%0.78%54.0bp (65.5bp)SD0001.1_at_AC_acceptor/Jaspar(0.748)
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motif file (matrix)
8 C A T G T G C A C G T A G T A C T G C A G A T C T G C A G C T A C G A T A T C G 1e-12-2.929e+012.54%0.63%52.5bp (62.4bp)NR3C2/MA0727.1/Jaspar(0.656)
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motif file (matrix)
9 A C G T A T C G C T G A C G T A C G T A C G T A A T G C C G A T A C G T C A T G A C G T C T A G 1e-12-2.855e+010.93%0.06%44.7bp (52.1bp)Nr2e3/MA0164.1/Jaspar(0.609)
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motif file (matrix)
10 C G T A A T C G G A C T T A G C C G T A G C A T C G A T A T C G G C T A T G A C 1e-12-2.851e+019.34%5.00%57.3bp (65.0bp)NR1H4/MA1110.1/Jaspar(0.719)
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motif file (matrix)
11 * C A G T C T A G T C A G C T A G G C A T C G T A C G T A T C A G 1e-11-2.760e+0138.61%30.37%55.5bp (62.4bp)SD0001.1_at_AC_acceptor/Jaspar(0.732)
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motif file (matrix)
12 * G C A T A G C T A G T C A G T C G C T A T A G C G T C A T A G C C G T A A C T G A T G C A G C T 1e-11-2.733e+015.63%2.47%57.6bp (61.1bp)POL009.1_DCE_S_II/Jaspar(0.619)
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motif file (matrix)
13 * G T A C A C G T A C G T A C G T T G A C C G T A A C T G A G C T C G A T A G T C G T A C A T G C 1e-11-2.631e+012.29%0.57%54.3bp (61.9bp)PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer(0.729)
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motif file (matrix)
14 * A C T G A T G C G T C A G T C A C T G A C T G A A C T G A C T G 1e-11-2.536e+0113.30%8.31%56.6bp (61.5bp)SCRT2/MA0744.1/Jaspar(0.721)
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motif file (matrix)
15 * C G T A C G T A A G T C G C A T C G T A A C T G G T A C G T C A C G T A A T G C G T C A C A G T 1e-10-2.503e+010.56%0.02%43.7bp (29.7bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.649)
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motif file (matrix)
16 * C G A T C T A G A T C G A G C T G A T C T G A C G T C A G A C T G T A C C G A T 1e-10-2.487e+012.78%0.85%56.4bp (64.2bp)NEUROD1/MA1109.1/Jaspar(0.646)
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motif file (matrix)
17 * C G T A A C T G C G A T G A C T C T A G C G T A T A C G C G A T T G A C G C T A 1e-10-2.475e+012.29%0.60%55.1bp (62.7bp)AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.783)
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motif file (matrix)
18 * C T A G C T A G T C G A G A T C A G C T A T G C C G T A A C T G G T C A G T A C 1e-10-2.467e+012.17%0.55%52.4bp (63.6bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.633)
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motif file (matrix)
19 * T A G C C T A G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G T C C G T A 1e-9-2.294e+010.37%0.01%38.1bp (12.6bp)FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer(0.626)
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motif file (matrix)
20 * A G T C A C G T G T C A A C G T A C T G A C G T A C T G C G T A C G T A A C G T C T A G A G T C 1e-9-2.282e+010.43%0.01%50.5bp (46.1bp)POU3F4/MA0789.1/Jaspar(0.660)
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motif file (matrix)
21 * A C T G C A G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G 1e-9-2.254e+010.50%0.02%18.3bp (62.3bp)ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer(0.657)
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motif file (matrix)
22 * A T C G C T A G A C T G C G T A A T G C T A C G A C G T G C A T A G T C C G T A 1e-9-2.236e+010.99%0.12%55.6bp (54.4bp)HIF1A/MA1106.1/Jaspar(0.629)
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motif file (matrix)
23 * A C T G A C T G T A G C A T C G C G T A G A T C A T C G A C T G A C G T C G T A 1e-9-2.225e+010.56%0.02%61.6bp (49.7bp)PB0051.1_Osr2_1/Jaspar(0.594)
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motif file (matrix)
24 * T C G A C T G A T C G A T G A C T G C A A G T C A C T G C G A T C A T G A T C G 1e-9-2.188e+013.65%1.45%56.7bp (60.0bp)Npas2/MA0626.1/Jaspar(0.831)
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motif file (matrix)
25 * A C G T A C G T C G T A A C T G C G T A A C T G A G T C A C G T A C T G C G T A A G T C C G T A 1e-9-2.187e+010.31%0.00%15.7bp (0.0bp)Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer(0.695)
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motif file (matrix)
26 * A C T G C G T A C G T A A C T G C G T A A C T G A G C T C G T A C G T A A C T G C G T A A C T G 1e-9-2.187e+010.31%0.00%28.3bp (0.0bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.611)
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motif file (matrix)
27 * A G T C T G C A C T G A C G A T T A G C C A T G C T A G A C G T 1e-9-2.137e+0117.14%11.92%58.6bp (61.3bp)NFY(CCAAT)/Promoter/Homer(0.696)
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motif file (matrix)
28 * A C G T A C G T T G C A A C G T A C G T A C T G A C T G A C G T A C T G G T C A A C G T A C G T 1e-8-2.054e+010.37%0.01%43.2bp (38.2bp)HOXB13/MA0901.1/Jaspar(0.681)
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motif file (matrix)
29 * C G T A A C G T C G T A A G C T G T A C A G T C A C G T A T G C A T C G A G T C A C G T A G T C 1e-8-2.054e+010.37%0.01%58.1bp (36.2bp)SD0003.1_at_AC_acceptor/Jaspar(0.670)
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motif file (matrix)
30 * C T A G C G T A C A T G C G A T C T A G A T C G T G A C G T C A 1e-8-1.993e+0141.09%34.05%56.0bp (62.6bp)Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer(0.774)
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motif file (matrix)
31 * A C G T G A C T A C G T C A T G T C A G T G A C G T C A T G A C C G A T C A G T 1e-8-1.897e+0127.04%21.05%54.8bp (60.8bp)PB0145.1_Mafb_2/Jaspar(0.677)
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motif file (matrix)
32 * A C T G C G T A C G T A A G T C A C G T A C T G C G T A G T A C A C T G G T C A 1e-8-1.873e+010.74%0.08%50.4bp (51.0bp)PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.641)
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motif file (matrix)
33 * A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T 1e-8-1.843e+010.31%0.01%30.0bp (48.2bp)FOXF2/MA0030.1/Jaspar(0.627)
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motif file (matrix)
34 * G A T C G T A C G C A T A G C T C T A G T A C G C G A T A C T G A T C G T C A G 1e-7-1.727e+012.10%0.70%51.2bp (59.7bp)PB0167.1_Sox13_2/Jaspar(0.644)
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motif file (matrix)
35 * A C G T T A G C G C A T C T G A G T A C G C A T G T A C G C A T T G A C T G C A 1e-7-1.724e+014.89%2.50%59.6bp (63.7bp)PB0140.1_Irf6_2/Jaspar(0.593)
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motif file (matrix)
36 * C T A G C T A G C G A T C T G A C G T A T C G A A G T C A G T C 1e-7-1.715e+019.47%6.01%55.8bp (60.7bp)FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer(0.705)
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motif file (matrix)
37 * C G A T A T G C G C A T A G T C G C A T A T C G T G C A C T G A G C T A C G A T A T C G G T A C 1e-7-1.657e+019.84%6.37%54.4bp (60.8bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.670)
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motif file (matrix)
38 * G A T C G A C T T A G C T C G A C T A G T C A G T A C G G A T C G C T A A G T C 1e-7-1.648e+015.75%3.18%58.4bp (61.5bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.734)
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motif file (matrix)
39 * A C T G A C G T G A T C C G T A A G T C G A T C C G T A A C T G A C G T A G T C C G T A A G T C 1e-7-1.643e+010.31%0.01%39.3bp (13.8bp)PKNOX2/MA0783.1/Jaspar(0.709)
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motif file (matrix)
40 * A G T C A C G T A C T G G T A C C A G T A T G C C A T G C T A G 1e-7-1.616e+0112.31%8.47%56.1bp (62.8bp)PB0199.1_Zfp161_2/Jaspar(0.696)
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motif file (matrix)
41 * C A T G G C T A G C T A C A T G A G C T A G T C C G A T A C G T A G T C A G C T 1e-6-1.578e+0110.09%6.66%60.2bp (61.4bp)POL008.1_DCE_S_I/Jaspar(0.627)
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motif file (matrix)
42 * A C T G C G T A A G C T A C G T C G T A A T C G A C T G A G C T 1e-6-1.480e+012.60%1.08%53.6bp (64.3bp)GSC2/MA0891.1/Jaspar(0.743)
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motif file (matrix)
43 * C G T A C T A G A C G T G T C A C G T A C G A T A C T G G A T C G T C A A C G T A G C T G T A C 1e-6-1.435e+010.56%0.06%45.3bp (61.9bp)ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer(0.707)
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motif file (matrix)
44 * A G T C A G T C A C G T C G T A A G T C C G T A A C T G A G T C 1e-5-1.205e+012.23%0.96%62.0bp (61.8bp)POL009.1_DCE_S_II/Jaspar(0.696)
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motif file (matrix)
45 * A C T G A G T C C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T 1e-5-1.166e+010.31%0.02%49.1bp (51.6bp)PB0079.1_Sry_1/Jaspar(0.710)
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motif file (matrix)
46 * A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G A G T C 1e-2-6.171e+000.12%0.01%53.3bp (29.2bp)PB0127.1_Gata6_2/Jaspar(0.613)
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motif file (matrix)
47 * A G T C A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C C G T A A C G T C G T A 1e-2-6.171e+000.12%0.00%41.8bp (41.1bp)POL006.1_BREu/Jaspar(0.622)
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motif file (matrix)