Homer de novo Motif Results (4a_Meth_RUVrk3/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 381
Total background sequences = 49222
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-53-1.233e+0274.54%35.51%184.6bp (192.8bp)Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer(0.935)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-17-4.110e+0110.76%1.92%199.7bp (189.7bp)MA0514.1_Sox3/Jaspar(0.636)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-13-3.170e+0138.06%20.93%194.2bp (191.4bp)MA0442.1_SOX10/Jaspar(0.759)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-12-2.820e+019.19%2.09%156.8bp (182.2bp)PB0121.1_Foxj3_2/Jaspar(0.704)
More Information | Similar Motifs Found		motif file (matrix)
5 *1e-11-2.710e+0152.23%34.68%207.0bp (193.3bp)Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer(0.786)
More Information | Similar Motifs Found		motif file (matrix)
6 *1e-10-2.512e+016.04%0.99%233.4bp (185.3bp)MA0514.1_Sox3/Jaspar(0.631)
More Information | Similar Motifs Found		motif file (matrix)
7 *1e-10-2.389e+0150.66%34.32%213.6bp (193.6bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.673)
More Information | Similar Motifs Found		motif file (matrix)
8 *1e-8-2.027e+012.89%0.22%214.6bp (205.3bp)MA0130.1_ZNF354C/Jaspar(0.608)
More Information | Similar Motifs Found		motif file (matrix)
9 *1e-8-2.022e+0111.55%4.17%235.4bp (192.6bp)PB0026.1_Gm397_1/Jaspar(0.710)
More Information | Similar Motifs Found		motif file (matrix)
10 *1e-8-1.912e+017.35%1.98%209.5bp (188.2bp)Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer(0.754)
More Information | Similar Motifs Found		motif file (matrix)
11 *1e-8-1.886e+0135.96%22.94%223.9bp (190.3bp)PB0131.1_Gmeb1_2/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
12 *1e-7-1.701e+012.62%0.24%179.7bp (212.0bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.768)
More Information | Similar Motifs Found		motif file (matrix)
13 *1e-7-1.693e+0116.80%8.23%187.2bp (190.2bp)Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.596)
More Information | Similar Motifs Found		motif file (matrix)
14 *1e-7-1.685e+0111.29%4.51%196.1bp (189.0bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.707)
More Information | Similar Motifs Found		motif file (matrix)
15 *1e-7-1.636e+019.71%3.62%245.6bp (192.0bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.610)
More Information | Similar Motifs Found		motif file (matrix)
16 *1e-7-1.627e+012.10%0.14%161.4bp (181.5bp)PB0195.1_Zbtb3_2/Jaspar(0.686)
More Information | Similar Motifs Found		motif file (matrix)
17 *1e-6-1.574e+0111.81%5.04%218.5bp (194.8bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.609)
More Information | Similar Motifs Found		motif file (matrix)
18 *1e-6-1.407e+019.45%3.81%190.7bp (187.6bp)PB0129.1_Glis2_2/Jaspar(0.631)
More Information | Similar Motifs Found		motif file (matrix)
19 *1e-4-1.042e+010.52%0.00%79.6bp (0.0bp)PB0195.1_Zbtb3_2/Jaspar(0.668)
More Information | Similar Motifs Found		motif file (matrix)
20 *1e-4-1.002e+017.09%3.00%179.2bp (193.4bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.651)
More Information | Similar Motifs Found		motif file (matrix)
21 *1e-3-7.666e+000.52%0.01%55.7bp (216.9bp)PB0013.1_Eomes_1/Jaspar(0.668)
More Information | Similar Motifs Found		motif file (matrix)
22 *1e-2-4.865e+000.26%0.00%27.8bp (159.2bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.661)
More Information | Similar Motifs Found		motif file (matrix)
23 *1e-1-4.263e+004.20%2.26%349.0bp (185.9bp)MA0479.1_FOXH1/Jaspar(0.695)
More Information | Similar Motifs Found		motif file (matrix)