Homer de novo Motif Results (B6_minus_B1_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 27086
Total background sequences = 26990
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C G T A T C G A G T C C G A T A G C T A G T C A G T C G T A C A G T C A C G T A C G T G T A C 1e-43-1.001e+020.17%0.01%50.0bp (52.5bp)MZF1(var.2)/MA0057.1/Jaspar(0.675)
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motif file (matrix)
2 A T C G A C G T T C A G A C G T C T A G C G T A A T C G C T G A A C G T C T A G C G T A C T G A 1e-42-9.698e+010.16%0.01%58.2bp (31.6bp)PB0178.1_Sox8_2/Jaspar(0.654)
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motif file (matrix)
3 A G T C A T C G T G C A A G C T C A T G A C T G G T C A A G T C C G T A C A G T 1e-42-9.686e+010.13%0.00%56.3bp (0.0bp)PB0189.1_Tcfap2a_2/Jaspar(0.589)
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motif file (matrix)
4 A G C T A C T G A C G T C T A G A C T G A C G T C G T A C G A T A C G T A C G T A T C G A C T G 1e-40-9.388e+010.16%0.01%53.9bp (35.2bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.696)
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motif file (matrix)
5 A T G C A C G T A G C T C G A T C T A G C G A T A C T G C G T A A C G T A T C G A C G T A C T G 1e-39-9.144e+010.28%0.04%58.1bp (57.4bp)SOX10/MA0442.2/Jaspar(0.648)
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motif file (matrix)
6 G C A T A T G C G C T A G A T C C T A G C T G A C T A G C T G A C G A T A G T C C G T A A C T G 1e-38-8.923e+012.47%1.43%55.6bp (55.9bp)Nr2f6(var.2)/MA0728.1/Jaspar(0.622)
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motif file (matrix)
7 A C G T G T A C A G C T C G T A A C T G A C G T A C G T C A G T A C G T C G A T C G T A A C G T 1e-37-8.739e+010.21%0.02%53.1bp (42.9bp)PH0040.1_Hmbox1/Jaspar(0.600)
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motif file (matrix)
8 G A T C G T A C A G T C T C G A T G C A T C G A G A C T A G T C A C G T T G A C C G T A A G C T 1e-37-8.651e+010.70%0.23%57.7bp (57.2bp)Gfi1/MA0038.1/Jaspar(0.640)
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motif file (matrix)
9 A C G T C T A G C T G A C T A G A C G T A G T C C G T A C G T A A C G T C G A T C G T A C T G A 1e-35-8.204e+010.34%0.07%51.6bp (46.7bp)PH0009.1_Bsx/Jaspar(0.716)
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motif file (matrix)
10 A G C T C G A T C A T G C G T A G C T A G A C T A G T C T G C A C G A T C A T G T C A G T C A G 1e-33-7.622e+010.29%0.05%53.5bp (58.8bp)Hoxa9/MA0594.1/Jaspar(0.712)
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motif file (matrix)
11 A G T C A C T G G T A C A G T C C G T A C G A T A T C G A C G T C G T A A C T G 1e-32-7.576e+010.11%0.01%65.3bp (6.4bp)YY1(Zf)/Promoter/Homer(0.665)
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motif file (matrix)
12 G C A T C T G A G A T C G A T C G A T C G C T A G C T A G A T C A C T G A G C T A C G T A G C T 1e-32-7.576e+010.11%0.01%54.2bp (32.4bp)PB0133.1_Hic1_2/Jaspar(0.574)
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motif file (matrix)
13 C T A G A C T G A G T C A G T C A C G T A G T C G A T C C G T A A C T G G T A C A C G T G T A C 1e-32-7.545e+010.19%0.02%53.1bp (64.8bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.614)
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motif file (matrix)
14 A G C T C A G T G T A C C G A T T G A C T C A G G C A T G T C A G T C A A C G T A T G C A G T C 1e-30-6.997e+010.13%0.01%63.3bp (55.5bp)PITX3/MA0714.1/Jaspar(0.676)
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motif file (matrix)
15 A C T G A G T C A C G T C G T A C G T A A C G T C A G T A C G T A G T C C G T A T G A C A C G T 1e-30-6.919e+010.33%0.07%49.7bp (64.4bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.619)
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motif file (matrix)
16 G T C A C G T A T C A G A T C G T A C G G T C A C G T A C G T A C A G T C G T A 1e-30-6.914e+014.82%3.47%55.0bp (56.6bp)SD0002.1_at_AC_acceptor/Jaspar(0.726)
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motif file (matrix)
17 A C G T T C A G A C T G A C G T C G T A C A T G C G T A A C T G G T A C A G T C 1e-29-6.843e+012.25%1.37%55.7bp (51.9bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.697)
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motif file (matrix)
18 A T G C G A T C G T C A A G C T C G T A G A C T C G A T C A T G C A G T T G A C 1e-28-6.674e+0117.13%14.65%55.9bp (60.6bp)Neurog1/MA0623.1/Jaspar(0.773)
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motif file (matrix)
19 A G C T T A G C T A G C C G A T A C T G C G T A A C T G A C T G A G T C A G T C A G C T A G T C 1e-28-6.631e+010.44%0.13%56.1bp (60.3bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.762)
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motif file (matrix)
20 G T A C G T A C C G T A C T A G G C A T C G T A C T A G C A T G C T A G C T A G G T A C G T A C 1e-27-6.426e+010.12%0.01%53.8bp (39.0bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.683)
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motif file (matrix)
21 C T G A A C G T A C T G A C T G A C G T A G C T A C G T T A G C 1e-27-6.249e+016.68%5.15%56.5bp (59.8bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.720)
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motif file (matrix)
22 A C T G A C T G A C T G A C T G A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C T G 1e-27-6.237e+013.13%2.12%54.8bp (52.5bp)NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer(0.690)
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motif file (matrix)
23 C T G A C T A G G C T A A G C T T G C A C G T A C A T G A C T G C T A G A G T C 1e-26-6.152e+010.60%0.22%55.6bp (59.9bp)Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer(0.772)
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motif file (matrix)
24 A G T C A C G T A T C G T A G C G T C A C G A T A C G T C G T A 1e-25-5.964e+0111.11%9.19%55.6bp (60.6bp)PB0091.1_Zbtb3_1/Jaspar(0.714)
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motif file (matrix)
25 A C T G T G A C T G C A C T G A C A T G A T G C A C G T C G T A T G C A G A T C 1e-25-5.922e+010.58%0.22%57.9bp (62.1bp)Nr2e3/MA0164.1/Jaspar(0.611)
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motif file (matrix)
26 A C T G A C G T A G T C C G T A A C G T C G T A A C G T A C G T A G T C A C T G C G T A A C G T 1e-25-5.867e+010.11%0.01%61.7bp (38.9bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.622)
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motif file (matrix)
27 A T G C C G A T G T C A C T G A A G T C C G T A A G T C A C T G A C T G A C G T 1e-24-5.663e+010.31%0.08%57.3bp (41.2bp)PB0045.1_Myb_1/Jaspar(0.548)
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motif file (matrix)
28 C T A G A C G T A C G T C T G A A C T G A T G C A G T C C G T A A C T G C T A G T G C A A G T C 1e-24-5.641e+010.53%0.20%59.4bp (44.0bp)PH0168.1_Hnf1b/Jaspar(0.613)
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motif file (matrix)
29 G C A T A C T G C T G A C G T A C A G T C G T A C A T G T A G C 1e-24-5.599e+0127.99%25.24%56.1bp (59.9bp)ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer(0.690)
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motif file (matrix)
30 C G T A A G C T A C T G A C G T G T C A A T C G A C T G A C G T A G T C G T C A 1e-24-5.593e+010.11%0.01%54.1bp (47.2bp)RORA(var.2)/MA0072.1/Jaspar(0.868)
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motif file (matrix)
31 A C T G A T C G A G T C T C G A A C T G C T G A A C G T G T A C 1e-24-5.540e+013.81%2.74%55.2bp (57.2bp)Hand1::Tcf3/MA0092.1/Jaspar(0.669)
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motif file (matrix)
32 C A G T C G A T G T C A A C G T A G T C A C G T C T G A G A T C C G A T C T G A C G T A C G T A 1e-22-5.211e+012.00%1.27%53.9bp (52.0bp)PB0021.1_Gata3_1/Jaspar(0.656)
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motif file (matrix)
33 C G T A A T C G G C A T A C T G G T A C G A C T T C G A G T A C G C T A T C G A A G C T T G C A 1e-22-5.084e+010.61%0.26%55.7bp (53.5bp)DMRT3/MA0610.1/Jaspar(0.640)
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motif file (matrix)
34 A C T G A G T C A C G T C G A T A C G T A G T C C G T A A C T G A T G C A C T G 1e-21-5.053e+010.10%0.01%57.8bp (48.6bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.667)
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motif file (matrix)
35 A T G C G T A C G A T C G A C T A C G T A G C T C A G T T C A G A G T C G C A T 1e-21-4.903e+0112.68%10.83%55.1bp (57.2bp)SCRT2/MA0744.1/Jaspar(0.639)
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motif file (matrix)
36 T A C G G C T A T A G C T A C G C A G T G C A T G T A C C G A T A C T G G A C T T C G A A G C T 1e-20-4.788e+010.10%0.01%55.1bp (50.4bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.570)
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motif file (matrix)
37 G A C T C T G A C T A G T C G A T A G C G A C T A C G T C G T A C A G T G T A C G C T A A G T C 1e-20-4.788e+010.10%0.01%59.1bp (50.0bp)PB0022.1_Gata5_1/Jaspar(0.686)
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motif file (matrix)
38 A C G T A G T C C G T A C G T A A G T C A G C T A C G T C G T A A C T G C G T A 1e-18-4.275e+010.14%0.02%55.3bp (54.5bp)VDR/MA0693.2/Jaspar(0.625)
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motif file (matrix)
39 A G T C A G T C A C G T A C T G A C T G A C G T C G T A A T C G A C T G C T G A 1e-16-3.911e+010.11%0.02%51.2bp (34.7bp)ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer(0.628)
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motif file (matrix)
40 G T A C A C T G T A G C A G T C A G T C A C T G G T C A A G T C 1e-16-3.812e+013.89%2.99%55.8bp (52.3bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.649)
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motif file (matrix)
41 T A C G T A G C A T G C T C A G T A G C A T C G C T A G G A T C C A T G A T C G 1e-15-3.499e+011.83%1.25%55.3bp (46.6bp)PB0010.1_Egr1_1/Jaspar(0.760)
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motif file (matrix)
42 A T G C A C T G T C G A T G C A A G T C T A C G A C T G G T A C T G C A G C A T 1e-14-3.281e+010.08%0.01%51.7bp (16.0bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.692)
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motif file (matrix)
43 A G T C A C G T C G T A C G T A C G T A C G T A C G T A A G T C A G T C A G T C 1e-13-3.045e+010.07%0.01%53.6bp (34.1bp)POL012.1_TATA-Box/Jaspar(0.571)
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motif file (matrix)
44 A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C T G A C T G C G T A 1e-13-3.045e+010.07%0.01%43.3bp (24.5bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.699)
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motif file (matrix)
45 * A C T G A G T C A C T G C G T A A C G T C G T A A T C G A C T G 1e-11-2.588e+010.07%0.01%48.4bp (47.4bp)ZBED1/MA0749.1/Jaspar(0.654)
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motif file (matrix)
46 * A C T G A C T G A C T G A G T C A C T G A C G T A G T C A G T C 1e-9-2.138e+010.07%0.01%50.2bp (37.1bp)PB0052.1_Plagl1_1/Jaspar(0.726)
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motif file (matrix)
47 * C G T A A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G 1e-8-1.933e+010.14%0.05%55.4bp (51.3bp)MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer(0.584)
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motif file (matrix)
48 * A G T C A G T C A C T G A C G T C G T A A C T G A C G T A C G T 1e-7-1.762e+010.12%0.04%52.6bp (26.2bp)HMBOX1/MA0895.1/Jaspar(0.666)
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motif file (matrix)
49 * A C G T A C T G A G T C A C T G A G T C A C G T A G T C A C T G 1e-7-1.740e+010.05%0.01%60.1bp (12.1bp)PB0044.1_Mtf1_1/Jaspar(0.716)
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motif file (matrix)
50 * C G T A A C G T A C G T A G T C A C T G A C T G C G T A A G T C 1e-6-1.596e+010.06%0.01%54.3bp (55.3bp)HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer(0.666)
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motif file (matrix)