Homer de novo Motif Results (svz_Sal_RUVrk3/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 628
Total background sequences = 42320
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 *1e-10-2.508e+0117.04%8.63%290.9bp (453.3bp)MA0469.1_E2F3/Jaspar(0.742)
More Information | Similar Motifs Found
motif file (matrix)
2 *1e-10-2.474e+0111.46%4.81%243.8bp (251.8bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.894)
More Information | Similar Motifs Found
motif file (matrix)
3 *1e-10-2.309e+0139.17%27.35%333.9bp (493.9bp)PB0199.1_Zfp161_2/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
4 *1e-9-2.100e+014.14%0.94%183.4bp (246.5bp)MA0063.1_Nkx2-5/Jaspar(0.731)
More Information | Similar Motifs Found
motif file (matrix)
5 *1e-8-2.061e+016.85%2.37%360.1bp (271.1bp)TATA-Box(TBP)/Promoter/Homer(0.753)
More Information | Similar Motifs Found
motif file (matrix)
6 *1e-8-2.059e+0127.55%17.81%302.1bp (472.4bp)PB0095.1_Zfp161_1/Jaspar(0.739)
More Information | Similar Motifs Found
motif file (matrix)
7 *1e-8-2.045e+011.59%0.10%175.2bp (237.0bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.665)
More Information | Similar Motifs Found
motif file (matrix)
8 *1e-8-2.041e+0121.66%12.99%331.8bp (473.0bp)POL001.1_MTE/Jaspar(0.579)
More Information | Similar Motifs Found
motif file (matrix)
9 *1e-8-2.019e+014.62%1.21%255.6bp (254.3bp)MA0498.1_Meis1/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
10 *1e-8-1.982e+015.10%1.47%222.2bp (296.1bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.664)
More Information | Similar Motifs Found
motif file (matrix)
11 *1e-8-1.961e+0117.68%10.00%336.1bp (292.7bp)PB0029.1_Hic1_1/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)
12 *1e-8-1.891e+014.62%1.28%195.4bp (305.6bp)MA0483.1_Gfi1b/Jaspar(0.563)
More Information | Similar Motifs Found
motif file (matrix)
13 *1e-7-1.784e+014.14%1.11%209.8bp (274.3bp)Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer(0.647)
More Information | Similar Motifs Found
motif file (matrix)
14 *1e-7-1.766e+012.39%0.37%273.2bp (290.7bp)PH0044.1_Homez/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
15 *1e-7-1.670e+015.73%2.04%300.6bp (338.0bp)POL013.1_MED-1/Jaspar(0.635)
More Information | Similar Motifs Found
motif file (matrix)
16 *1e-7-1.664e+013.03%0.65%294.7bp (310.2bp)Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer(0.733)
More Information | Similar Motifs Found
motif file (matrix)
17 *1e-7-1.624e+013.18%0.74%448.2bp (232.9bp)MA0515.1_Sox6/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
18 *1e-6-1.607e+011.91%0.25%268.4bp (339.0bp)Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer(0.715)
More Information | Similar Motifs Found
motif file (matrix)
19 *1e-6-1.511e+015.10%1.81%360.3bp (379.4bp)ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer(0.607)
More Information | Similar Motifs Found
motif file (matrix)
20 *1e-6-1.497e+0114.01%8.04%299.3bp (264.2bp)MA0164.1_Nr2e3/Jaspar(0.783)
More Information | Similar Motifs Found
motif file (matrix)
21 *1e-6-1.435e+0138.22%29.11%334.2bp (358.1bp)MA0164.1_Nr2e3/Jaspar(0.577)
More Information | Similar Motifs Found
motif file (matrix)
22 *1e-5-1.379e+017.32%3.35%296.9bp (230.7bp)MA0035.3_Gata1/Jaspar(0.669)
More Information | Similar Motifs Found
motif file (matrix)
23 *1e-5-1.314e+013.50%1.07%252.6bp (282.7bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.655)
More Information | Similar Motifs Found
motif file (matrix)
24 *1e-5-1.313e+0129.94%21.96%316.0bp (469.9bp)MA0469.1_E2F3/Jaspar(0.610)
More Information | Similar Motifs Found
motif file (matrix)
25 *1e-5-1.312e+0127.07%19.41%327.0bp (482.6bp)MA0162.2_EGR1/Jaspar(0.747)
More Information | Similar Motifs Found
motif file (matrix)
26 *1e-5-1.293e+010.64%0.02%184.5bp (185.8bp)MA0019.1_Ddit3::Cebpa/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
27 *1e-5-1.287e+0118.15%11.83%288.2bp (308.6bp)X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.786)
More Information | Similar Motifs Found
motif file (matrix)
28 *1e-3-9.154e+003.18%1.20%320.7bp (334.3bp)MA0117.1_Mafb/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
29 *1e-3-7.250e+0069.11%62.95%351.3bp (327.0bp)PB0195.1_Zbtb3_2/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
30 *1e-2-6.792e+006.85%4.15%330.7bp (335.2bp)PB0130.1_Gm397_2/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
31 *1e-2-6.379e+007.48%4.75%360.5bp (331.5bp)GFX(?)/Promoter/Homer(0.644)
More Information | Similar Motifs Found
motif file (matrix)
32 *1e-1-4.217e+000.16%0.00%47.4bp (0.0bp)MA0146.2_Zfx/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)