Homer de novo Motif Results (svz_Meth_RUVrk3/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2555
Total background sequences = 47061
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-112-2.600e+021.96%0.00%296.0bp (86.2bp)PH0067.1_Hoxc12/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
2 1e-91-2.114e+021.64%0.01%296.7bp (42.5bp)PB0163.1_Six6_2/Jaspar(0.601)
More Information | Similar Motifs Found
motif file (matrix)
3 1e-91-2.113e+021.76%0.01%250.1bp (98.6bp)MA0124.1_NKX3-1/Jaspar(0.752)
More Information | Similar Motifs Found
motif file (matrix)
4 1e-87-2.009e+021.41%0.00%282.4bp (0.0bp)PB0119.1_Foxa2_2/Jaspar(0.700)
More Information | Similar Motifs Found
motif file (matrix)
5 1e-86-1.995e+021.57%0.01%275.4bp (185.2bp)PB0129.1_Glis2_2/Jaspar(0.661)
More Information | Similar Motifs Found
motif file (matrix)
6 1e-84-1.935e+0218.75%7.03%226.1bp (203.4bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.968)
More Information | Similar Motifs Found
motif file (matrix)
7 1e-79-1.824e+021.64%0.01%283.7bp (41.6bp)MA0122.1_Nkx3-2/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
8 1e-78-1.814e+021.29%0.00%280.9bp (0.0bp)PB0002.1_Arid5a_1/Jaspar(0.635)
More Information | Similar Motifs Found
motif file (matrix)
9 1e-76-1.752e+022.19%0.04%284.8bp (220.0bp)PB0171.1_Sox18_2/Jaspar(0.722)
More Information | Similar Motifs Found
motif file (matrix)
10 1e-73-1.702e+021.37%0.00%309.6bp (127.5bp)PB0157.1_Rara_2/Jaspar(0.622)
More Information | Similar Motifs Found
motif file (matrix)
11 1e-70-1.620e+021.80%0.02%315.6bp (241.6bp)MA0151.1_ARID3A/Jaspar(0.667)
More Information | Similar Motifs Found
motif file (matrix)
12 1e-69-1.606e+021.60%0.01%265.3bp (186.9bp)PB0133.1_Hic1_2/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
13 1e-68-1.580e+021.53%0.01%290.8bp (196.2bp)Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.600)
More Information | Similar Motifs Found
motif file (matrix)
14 1e-67-1.559e+021.14%0.00%294.0bp (0.0bp)CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.595)
More Information | Similar Motifs Found
motif file (matrix)
15 1e-65-1.506e+021.33%0.01%232.6bp (55.0bp)PB0134.1_Hnf4a_2/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
16 1e-62-1.444e+021.57%0.02%295.1bp (181.4bp)MA0040.1_Foxq1/Jaspar(0.605)
More Information | Similar Motifs Found
motif file (matrix)
17 1e-60-1.392e+021.84%0.04%364.5bp (200.1bp)MA0158.1_HOXA5/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
18 1e-48-1.110e+021.10%0.01%297.2bp (222.1bp)MF0009.1_TRP(MYB)_class/Jaspar(0.662)
More Information | Similar Motifs Found
motif file (matrix)
19 1e-45-1.040e+0235.50%23.06%258.5bp (210.0bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.809)
More Information | Similar Motifs Found
motif file (matrix)
20 1e-41-9.604e+011.37%0.04%250.9bp (177.7bp)HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer(0.753)
More Information | Similar Motifs Found
motif file (matrix)
21 1e-40-9.364e+0144.46%31.73%242.0bp (208.2bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.831)
More Information | Similar Motifs Found
motif file (matrix)
22 1e-36-8.297e+0157.81%45.34%268.6bp (207.4bp)POL009.1_DCE_S_II/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
23 1e-32-7.451e+0147.63%36.08%285.7bp (205.6bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.670)
More Information | Similar Motifs Found
motif file (matrix)
24 1e-27-6.438e+0147.08%36.38%269.4bp (214.4bp)PB0208.1_Zscan4_2/Jaspar(0.719)
More Information | Similar Motifs Found
motif file (matrix)
25 1e-24-5.530e+011.72%0.22%265.5bp (197.7bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.774)
More Information | Similar Motifs Found
motif file (matrix)
26 1e-16-3.864e+012.04%0.48%276.6bp (207.2bp)PH0044.1_Homez/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
27 *1e-10-2.384e+015.01%2.68%282.4bp (200.2bp)PH0016.1_Cux1_1/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
28 *1e-7-1.731e+010.39%0.04%437.0bp (233.1bp)PB0091.1_Zbtb3_1/Jaspar(0.765)
More Information | Similar Motifs Found
motif file (matrix)
29 *1e-6-1.389e+010.35%0.04%379.2bp (192.6bp)MA0132.1_Pdx1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
30 *1e-5-1.271e+010.23%0.02%239.3bp (187.5bp)PB0208.1_Zscan4_2/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
31 *1e-5-1.210e+010.27%0.03%402.7bp (192.7bp)MA0122.1_Nkx3-2/Jaspar(0.605)
More Information | Similar Motifs Found
motif file (matrix)
32 *1e-2-5.205e+000.08%0.01%97.2bp (130.3bp)PB0079.1_Sry_1/Jaspar(0.566)
More Information | Similar Motifs Found
motif file (matrix)
33 *1e0-2.261e+000.35%0.22%268.3bp (221.4bp)MA0078.1_Sox17/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)