Homer de novo Motif Results (5a_Sal_RUVrk3/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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Total target sequences = 25
Total background sequences = 49663
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-12-2.826e+0116.00%0.01%220.3bp (202.0bp)PH0158.1_Rhox11_2/Jaspar(0.653)
More Information | Similar Motifs Found
motif file (matrix)
2 *1e-10-2.429e+0132.00%0.86%309.9bp (223.1bp)PB0065.1_Sox15_1/Jaspar(0.790)
More Information | Similar Motifs Found
motif file (matrix)
3 *1e-6-1.592e+018.00%0.00%20.0bp (0.0bp)PB0121.1_Foxj3_2/Jaspar(0.572)
More Information | Similar Motifs Found
motif file (matrix)
4 *1e-6-1.592e+018.00%0.00%221.5bp (0.0bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.663)
More Information | Similar Motifs Found
motif file (matrix)
5 *1e-6-1.592e+018.00%0.00%240.5bp (0.0bp)PB0002.1_Arid5a_1/Jaspar(0.597)
More Information | Similar Motifs Found
motif file (matrix)
6 *1e-6-1.592e+018.00%0.00%252.5bp (0.0bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.695)
More Information | Similar Motifs Found
motif file (matrix)
7 *1e-6-1.517e+0112.00%0.05%161.4bp (182.3bp)Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer(0.575)
More Information | Similar Motifs Found
motif file (matrix)
8 *1e-6-1.517e+0112.00%0.05%219.5bp (188.2bp)PH0041.1_Hmx1/Jaspar(0.773)
More Information | Similar Motifs Found
motif file (matrix)
9 *1e-6-1.482e+0120.00%0.60%301.2bp (225.8bp)PB0153.1_Nr2f2_2/Jaspar(0.609)
More Information | Similar Motifs Found
motif file (matrix)
10 *1e-6-1.454e+018.00%0.00%20.0bp (54.0bp)MA0078.1_Sox17/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
11 *1e-6-1.454e+018.00%0.00%132.5bp (194.4bp)MA0046.1_HNF1A/Jaspar(0.733)
More Information | Similar Motifs Found
motif file (matrix)
12 *1e-6-1.454e+018.00%0.01%196.5bp (287.1bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.634)
More Information | Similar Motifs Found
motif file (matrix)
13 *1e-6-1.454e+018.00%0.01%209.5bp (124.6bp)PB0170.1_Sox17_2/Jaspar(0.681)
More Information | Similar Motifs Found
motif file (matrix)
14 *1e-6-1.454e+018.00%0.01%449.0bp (86.3bp)MA0009.1_T/Jaspar(0.683)
More Information | Similar Motifs Found
motif file (matrix)
15 *1e-6-1.401e+0124.00%1.34%300.7bp (226.5bp)SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer(0.726)
More Information | Similar Motifs Found
motif file (matrix)
16 *1e-5-1.153e+018.00%0.02%316.5bp (191.5bp)MF0004.1_Nuclear_Receptor_class/Jaspar(0.676)
More Information | Similar Motifs Found
motif file (matrix)
17 *1e-3-9.052e+0028.00%4.72%181.9bp (220.0bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.666)
More Information | Similar Motifs Found
motif file (matrix)
18 *1e-3-8.713e+0028.00%4.98%247.0bp (203.8bp)PH0078.1_Hoxd13/Jaspar(0.751)
More Information | Similar Motifs Found
motif file (matrix)
19 *1e-3-7.595e+004.00%0.00%0.0bp (14.2bp)PB0179.1_Sp100_2/Jaspar(0.631)
More Information | Similar Motifs Found
motif file (matrix)
20 *1e-3-7.595e+004.00%0.00%0.0bp (0.0bp)MF0009.1_TRP(MYB)_class/Jaspar(0.631)
More Information | Similar Motifs Found
motif file (matrix)
21 *1e-3-7.595e+004.00%0.00%0.0bp (57.2bp)Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer(0.740)
More Information | Similar Motifs Found
motif file (matrix)
22 *1e-3-7.595e+004.00%0.00%0.0bp (126.1bp)PB0179.1_Sp100_2/Jaspar(0.745)
More Information | Similar Motifs Found
motif file (matrix)
23 *1e-3-7.595e+004.00%0.00%0.0bp (0.0bp)E2F(E2F)/Hela-CellCycle-Expression/Homer(0.690)
More Information | Similar Motifs Found
motif file (matrix)
24 *1e-3-7.595e+004.00%0.00%0.0bp (70.5bp)PH0040.1_Hmbox1/Jaspar(0.625)
More Information | Similar Motifs Found
motif file (matrix)
25 *1e-3-7.595e+004.00%0.00%0.0bp (0.0bp)PB0098.1_Zfp410_1/Jaspar(0.735)
More Information | Similar Motifs Found
motif file (matrix)
26 *1e-3-7.595e+004.00%0.00%0.0bp (139.6bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.741)
More Information | Similar Motifs Found
motif file (matrix)
27 *1e-2-6.902e+004.00%0.01%0.0bp (90.6bp)NRF(NRF)/Promoter/Homer(0.635)
More Information | Similar Motifs Found
motif file (matrix)
28 *1e-2-6.902e+004.00%0.00%0.0bp (104.3bp)PB0076.1_Sp4_1/Jaspar(0.714)
More Information | Similar Motifs Found
motif file (matrix)
29 *1e-2-6.902e+004.00%0.01%0.0bp (40.2bp)PB0081.1_Tcf1_1/Jaspar(0.724)
More Information | Similar Motifs Found
motif file (matrix)
30 *1e-2-6.902e+004.00%0.00%0.0bp (173.5bp)MA0006.1_Arnt::Ahr/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
31 *1e-2-6.902e+004.00%0.01%0.0bp (0.0bp)MA0493.1_Klf1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
32 *1e-2-6.902e+004.00%0.01%0.0bp (154.5bp)PB0181.1_Spdef_2/Jaspar(0.543)
More Information | Similar Motifs Found
motif file (matrix)
33 *1e-2-6.902e+004.00%0.00%0.0bp (100.1bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.673)
More Information | Similar Motifs Found
motif file (matrix)
34 *1e-2-6.902e+004.00%0.01%0.0bp (73.7bp)MA0133.1_BRCA1/Jaspar(0.606)
More Information | Similar Motifs Found
motif file (matrix)
35 *1e-2-6.209e+004.00%0.01%0.0bp (24.2bp)PB0139.1_Irf5_2/Jaspar(0.587)
More Information | Similar Motifs Found
motif file (matrix)
36 *1e-2-5.804e+004.00%0.01%7.1bp (256.5bp)PB0098.1_Zfp410_1/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)